Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0455
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-11|AAA79352.1| 312|Caenorhabditis elegans Hypothetical p... 34 0.063
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 32 0.25
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 32 0.25
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 32 0.33
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 32 0.33
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 32 0.33
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 31 0.44
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 31 0.44
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 31 0.77
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.77
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.0
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 30 1.0
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 30 1.0
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 30 1.0
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 30 1.3
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 30 1.3
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 1.8
AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical... 29 1.8
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 2.4
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 2.4
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 29 2.4
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 29 2.4
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 2.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 2.4
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.1
U58760-1|AAK31461.1| 244|Caenorhabditis elegans Interactor of f... 29 3.1
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 29 3.1
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 29 3.1
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 29 3.1
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 3.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 3.1
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 3.1
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 4.1
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 28 4.1
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 4.1
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 4.1
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 4.1
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 4.1
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 4.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 4.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 4.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 4.1
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 28 4.1
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 5.4
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 28 5.4
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 28 5.4
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 25 6.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 27 7.2
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 27 7.2
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 27 7.2
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 27 7.2
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 27 7.2
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 27 7.2
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 27 7.2
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 27 7.2
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 27 9.5
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 27 9.5
AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical... 27 9.5
AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical... 27 9.5
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 27 9.5
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 27 9.5
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 27 9.5
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 27 9.5
>U37429-11|AAA79352.1| 312|Caenorhabditis elegans Hypothetical
protein F09E5.12 protein.
Length = 312
Score = 34.3 bits (75), Expect = 0.063
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 2/98 (2%)
Frame = -1
Query: 444 PKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRPPRPLHWRES 265
P P Y P +P S + +PPI + A P A + PP HW
Sbjct: 211 PSPA-YSPVSPTYSTTSDEQEAAEPPIPIAARSPALARQQNDLPRRPIPLPPNRDHWTGH 269
Query: 264 RSV--PSPVGEAGWLRPYDRIFQAQQGMVPTVAVRAQL 157
++ SP RP DR Q ++P A QL
Sbjct: 270 PTLYYNSPYSFPRRPRPNDRENPEVQHLLPPYAYMMQL 307
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 32.3 bits (70), Expect = 0.25
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPA-APLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRP 292
PA P+ PG P+ AP S + PP PAG PG +G+P GS P
Sbjct: 172 PAGPPGPSGAPGQKGPSGAPGQPGRSGGASLPGPP--GPAGPPGPSGQP--GSNGNAGAP 227
Query: 291 PRPLHWRESRSVPSPVGEAG 232
P H + P P G G
Sbjct: 228 GAPGHVVDVPGTPGPAGPPG 247
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 363 EVPAGDPGSAGRP-KSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
+ PAG PG +G P + G + +P R S+P P G AG
Sbjct: 170 DCPAGPPGPSGAPGQKGPSGAPGQPGR----SGGASLPGPPGPAG 210
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 399 LSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTS-RPPRPLHWRESRSVPSPV 244
L P++ P + VPA P RP + S +T RPP P ES VP P+
Sbjct: 41 LRPVMPESTPSVAVPAKPPPL--RPSTQSVSSTDPRPPIPPRRSESNLVPPPI 91
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRP 283
P G PG+ G+P SGST + PP P
Sbjct: 212 PQGPPGAPGQPGSGSTPGPAGPPGP 236
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -1
Query: 366 IEVPAGDPGSAGRP-KSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
I+ P G PG AG P G P P H + P P G AG
Sbjct: 132 IKCPQGAPGPAGAPGNPGPQGPNGNPGAPAH-GGGQGPPGPPGPAG 176
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -1
Query: 351 GDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
GDPG AG P T+ T P P R P P GEAG
Sbjct: 167 GDPGEAGTPGRPGTDATPGLPGP------RGPPGPPGEAG 200
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -1
Query: 351 GDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
GDPG AG P T+ T P P R P P GEAG
Sbjct: 167 GDPGEAGTPGRPGTDATPGLPGP------RGPPGPPGEAG 200
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRP 283
PAG PG G P T +T+ PP P
Sbjct: 208 PAGQPGQPGEPGHSDTSSTAGPPGP 232
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.5 bits (68), Expect = 0.44
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Frame = +1
Query: 118 CFG----PHTASVCTHQQLCPNCNGRHHALLC 201
CFG H S C+ + C +C G HH + C
Sbjct: 348 CFGCLRSGHQRSKCSRPRTCNHCKGNHHTVFC 379
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 91 LPSDDGVFFCFGP-HTASVCTHQQLCPNCNGRHHALLC 201
+ +D+ C G H++S+C C C+GRHH C
Sbjct: 644 IANDNRCAVCAGERHSSSMCYSTLKCTYCSGRHHPAGC 681
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 372 PPIEVPAGDPGSAGRP-KSGSTETTSRPPRP 283
P + P G PGSAGRP K G+ P RP
Sbjct: 94 PGAQGPPGTPGSAGRPGKPGAPGLNGNPGRP 124
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.0
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPA-APLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRP 292
PA P+ PG P+ AP + S + PP PAG PG AG+P GS P
Sbjct: 174 PAGPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPP--GPAGPPGPAGQP--GSNGNAGAP 229
Query: 291 PRPLHWRESRSVPSPVGEAG 232
P + P P G G
Sbjct: 230 GAPGQVVDVPGTPGPAGPPG 249
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.0
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPA-APLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRP 292
PA P+ PG P+ AP + S + PP PAG PG AG+P GS P
Sbjct: 174 PAGPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPP--GPAGPPGPAGQP--GSNGNAGAP 229
Query: 291 PRPLHWRESRSVPSPVGEAG 232
P + P P G G
Sbjct: 230 GAPGQVVDVPGTPGPAGPPG 249
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.0
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPA-APLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRP 292
PA P+ PG P+ AP + S + PP PAG PG AG+P GS P
Sbjct: 174 PAGPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPP--GPAGPPGPAGQP--GSNGNAGAP 229
Query: 291 PRPLHWRESRSVPSPVGEAG 232
P + P P G G
Sbjct: 230 GAPGQVVDVPGTPGPAGPPG 249
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.0
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPA-APLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRP 292
PA P+ PG P+ AP + S + PP PAG PG AG+P GS P
Sbjct: 174 PAGPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPP--GPAGPPGPAGQP--GSNGNAGAP 229
Query: 291 PRPLHWRESRSVPSPVGEAG 232
P + P P G G
Sbjct: 230 GAPGQVVDVPGTPGPAGPPG 249
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 153 PAAVPELQRSAPCPVVPGKFGHTGAASQPRRP 248
P + +QR A P VPG G G+A P P
Sbjct: 222 PGKITNIQRPAGLPGVPGPIGPVGSAGTPGSP 253
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 414 PLSRRLSPMLQVLDPPIEVPAGDPGSA-GRPKSG 316
P S +P + VL+PP A DPGSA G P+ G
Sbjct: 864 PGSSSSTPAVIVLEPPPPYTAADPGSAMGGPRRG 897
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 414 PLSRRLSPMLQVLDPPIEVPAGDPGSA-GRPKSG 316
P S +P + VL+PP A DPGSA G P+ G
Sbjct: 864 PGSSSSTPAVIVLEPPPPYTAADPGSAMGGPRRG 897
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/79 (32%), Positives = 34/79 (43%)
Frame = -1
Query: 495 HRNIITELEPAQCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSG 316
H++ I L PA P P P A P L+P L PP+++P P + P
Sbjct: 1271 HKSAIAPLPPANTIMPPPPPYNQASAVP----LNPPRTAL-PPLQLPPLQPLQSESP--- 1322
Query: 315 STETTSRPPRPLHWRESRS 259
S + S PP L R RS
Sbjct: 1323 SWASMSAPPTALIPRTPRS 1341
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
P G PG+ G+P SG+ + PP P P G+ G
Sbjct: 214 PQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPG 255
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPA-APLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRP 292
PA P+ PG P+ AP + S + PP PAG PG +G+P GS P
Sbjct: 175 PAGPPGPSGAPGQKGPSGAPGAPGQSGGASLPGPP--GPAGPPGPSGQP--GSNGNAGAP 230
Query: 291 PRPLHWRESRSVPSPVGEAG 232
P + P P G G
Sbjct: 231 GAPGQVVDVPGTPGPAGPPG 250
>AC024791-20|AAO12400.1| 574|Caenorhabditis elegans Hypothetical
protein Y47G6A.5b protein.
Length = 574
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 372 PPIEVPAGDPGSAGRPKSGSTETTS-RPPRPLHWRESRSVPSPV 244
P + VPA P RP + S +T RPP P ES VP P+
Sbjct: 6 PSVAVPAKPPPL--RPSTQSVSSTDPRPPIPPRRSESNLVPPPI 47
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2
Query: 281 YIGESHDRYPHRSARLAGCARMTEFSRHNRAWCRPLQFGHSCWC 150
Y E + P R RL C + A CR L +G++C C
Sbjct: 2165 YRDEGPPQSPGRICRLNECLNPNRNTCDRNADCRDLDYGYTCTC 2208
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2
Query: 281 YIGESHDRYPHRSARLAGCARMTEFSRHNRAWCRPLQFGHSCWC 150
Y E + P R RL C + A CR L +G++C C
Sbjct: 2749 YRDEGPPQSPGRICRLNECLNPNRNTCDRNADCRDLDYGYTCTC 2792
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2
Query: 281 YIGESHDRYPHRSARLAGCARMTEFSRHNRAWCRPLQFGHSCWC 150
Y E + P R RL C + A CR L +G++C C
Sbjct: 2165 YRDEGPPQSPGRICRLNECLNPNRNTCDRNADCRDLDYGYTCTC 2208
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2
Query: 281 YIGESHDRYPHRSARLAGCARMTEFSRHNRAWCRPLQFGHSCWC 150
Y E + P R RL C + A CR L +G++C C
Sbjct: 2749 YRDEGPPQSPGRICRLNECLNPNRNTCDRNADCRDLDYGYTCTC 2792
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPA-APLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRP 292
PA P+ PG P+ AP + S + PP PAG PG +G+P GS P
Sbjct: 209 PAGPPGPSGAPGQKGPSGAPGAPGQSGGSALPGPP--GPAGSPGRSGQP--GSNGNVGAP 264
Query: 291 PRPLHWRESRSVPSPVGEAG 232
P + P P G G
Sbjct: 265 GAPGQVVDVPGAPGPAGPPG 284
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -1
Query: 369 PIEVPAGDPGSA-GRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAGWLRPYDRIFQAQ 196
P++ PAG+ GRP+ S+E + P+ + E + P G A W + + Q Q
Sbjct: 86 PVKNPAGEAKRGRGRPRKQSSEEKVQIPKVVVKFEPKKRGRPAGAAKWSQEVAVVLQKQ 144
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2
Query: 281 YIGESHDRYPHRSARLAGCARMTEFSRHNRAWCRPLQFGHSCWC 150
Y E + P R RL C + A CR L +G++C C
Sbjct: 2749 YRDEGPPQSPGRICRLNECLNPNRNTCDRNADCRDLDYGYTCTC 2792
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
PAGD GS G+P G+ RP + SR P P G AG
Sbjct: 225 PAGDAGSPGQP--GAPGQPGRPGKNAQGGSSR--PGPPGPAG 262
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = -1
Query: 351 GDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAGWLRPYDRIFQAQQGMVP 181
GD G AGRP S PP P + P G+ G P Q ++G+ P
Sbjct: 230 GDQGQAGRPGSDGAPGPQGPPGPPGQQGHPGQAGPAGQPGQPGP-----QGERGICP 281
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 372 PPIEVPAGDPGSAGRP-KSGSTETTSRPPRP 283
P + P G PG AGRP K G+ P RP
Sbjct: 92 PGAQGPPGTPGRAGRPGKPGAPGLNGNPGRP 122
>U58760-1|AAK31461.1| 244|Caenorhabditis elegans Interactor of
fizzy protein protein1 protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 147 ADACRVRPETKKNTIVAGQRC 85
A AC+V P TKKNTI C
Sbjct: 60 ASACKVPPSTKKNTIPIAFEC 80
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = -3
Query: 247 GRRGWLAAPV*PNFPGTTGHGADRCSSGTAAGVCRRLPCAARNKK 113
GR+G P P PG G G D + G AG C PC AR K
Sbjct: 169 GRKGPPGPPGGPGGPGEGGDGED-AAPGPDAGYC---PCPARAYK 209
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
P G PG+ GRP T + P P+ P P G G
Sbjct: 158 PPGPPGNGGRPGQRGTPGEAGTPGPVGEPGETGGPGPQGRPG 199
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/68 (35%), Positives = 29/68 (42%)
Frame = +3
Query: 201 PGKFGHTGAASQPRRPVRVPIVTLANVEAWVVGRWFRWSQTSAGRPNQGRQPGLQWEDLA 380
PG G G Q +P + IV LA GR Q G P +PG+ +D A
Sbjct: 188 PGSAGRAGPRGQAGQPGTIAIVGLA-------GR--PGPQGPLGEPGAQGEPGVDGKDGA 238
Query: 381 LEASGRGA 404
L A GR A
Sbjct: 239 LGAPGRKA 246
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 450 PNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRP 325
P PG +P AP S + P DP I+ G+PGS G P
Sbjct: 266 PIGPPG--QPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEP 305
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
PAGD GS G+P G + P R + SR +P P G G
Sbjct: 174 PAGDAGSPGQP--GHPGSPGNPGR--GGQRSRGLPGPSGRPG 211
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -1
Query: 366 IEVPAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
I PAG PG AG P + + + P R P P G AG
Sbjct: 132 ITCPAGAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAG 176
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 351 GDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
G PG G+P +G T +T++P P P P G AG
Sbjct: 216 GAPGPDGQPGAGGTTSTNQPGPP----GPAGPPGPAGPAG 251
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
PAG PG +G+P GS P P + P P G G
Sbjct: 207 PAGPPGPSGQP--GSNGNAGAPGAPGQVVDVPGTPGPAGPPG 246
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 247 GRRGWLAAPV*PNFPGTTGHGADRCSSGTAAGVCRRLPCAARNKKKHHRR 98
G G AP P PG G + G G PC AR++ HR+
Sbjct: 229 GPAGAPGAPGGPGQPGQDGQPGAPGNDGAPGGDAAYCPCPARSQVVKHRK 278
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -1
Query: 372 PPIEVPAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
P I PAG PG AG P + + S P E P G AG
Sbjct: 127 PCITCPAGAPGPAGAPGAPGPQGPSGAPGQDAVGEGPGPAGPQGPAG 173
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -2
Query: 374 ILPLKSRLATLVRPAGRSLAPPKPPP--DHPGLYI 276
++PL+ +G L P PPP DHP LY+
Sbjct: 149 VMPLEHAYRCARNQSGLYLPKPVPPPPEDHPSLYV 183
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 28.3 bits (60), Expect = 4.1
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Frame = -1
Query: 534 QPYCKIARQYCPAHRNIITELEPA---QCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPI 364
+P ++A + PA + E EP Q P RP P L +P
Sbjct: 228 EPLIEVAVEEAPAEEPVAEEAEPEAEKQEFELQAPPEGKRPRTP--NDLDNPTADEEPAA 285
Query: 363 EVPAGDPGSA--GRPKSGSTETTSRPPRPLHWRESRSVPSPVGEA 235
E+ A D GS PK+ ++E S PP P S P+P A
Sbjct: 286 ELEA-DAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAA 329
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 28.3 bits (60), Expect = 4.1
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Frame = -1
Query: 534 QPYCKIARQYCPAHRNIITELEPA---QCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPI 364
+P ++A + PA + E EP Q P RP P L +P
Sbjct: 178 EPLIEVAVEEAPAEEPVAEEAEPEAEKQEFELQAPPEGKRPRTP--NDLDNPTADEEPAA 235
Query: 363 EVPAGDPGSA--GRPKSGSTETTSRPPRPLHWRESRSVPSPVGEA 235
E+ A D GS PK+ ++E S PP P S P+P A
Sbjct: 236 ELEA-DAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAA 279
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 28.3 bits (60), Expect = 4.1
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Frame = -1
Query: 534 QPYCKIARQYCPAHRNIITELEPA---QCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPI 364
+P ++A + PA + E EP Q P RP P L +P
Sbjct: 228 EPLIEVAVEEAPAEEPVAEEAEPEAEKQEFELQAPPEGKRPRTP--NDLDNPTADEEPAA 285
Query: 363 EVPAGDPGSA--GRPKSGSTETTSRPPRPLHWRESRSVPSPVGEA 235
E+ A D GS PK+ ++E S PP P S P+P A
Sbjct: 286 ELEA-DAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAA 329
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 28.3 bits (60), Expect = 4.1
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Frame = -1
Query: 534 QPYCKIARQYCPAHRNIITELEPA---QCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPI 364
+P ++A + PA + E EP Q P RP P L +P
Sbjct: 228 EPLIEVAVEEAPAEEPVAEEAEPEAEKQEFELQAPPEGKRPRTP--NDLDNPTADEEPAA 285
Query: 363 EVPAGDPGSA--GRPKSGSTETTSRPPRPLHWRESRSVPSPVGEA 235
E+ A D GS PK+ ++E S PP P S P+P A
Sbjct: 286 ELEA-DAGSEVPPTPKTAASEKQSVPPTPKSAAPSEVPPTPKSAA 329
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -1
Query: 366 IEVPAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
I PAG PG AG P + + + P R P P G AG
Sbjct: 132 ITCPAGAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAG 176
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDP--GSAGRPKSGSTE---- 307
P + P P P P P P PP P G P GS P++G +
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Query: 306 TTSRPPRPLHWRESRSVPSPVG 241
T S PP P R++ P G
Sbjct: 326 TGSPPPPPRQKRQAPERSPPTG 347
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVP 253
P G P + GRP GS T S PP L R+ R P
Sbjct: 417 PTGSPPT-GRPPRGSPPTGS-PPTGLPSRQKRQAP 449
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDP--GSAGRPKSGSTE---- 307
P + P P P P P P PP P G P GS P++G +
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Query: 306 TTSRPPRPLHWRESRSVPSPVG 241
T S PP P R++ P G
Sbjct: 347 TGSPPPPPRQKRQAPERSPPTG 368
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVP 253
P G P + GRP GS T S PP L R+ R P
Sbjct: 438 PTGSPPT-GRPPRGSPPTGS-PPTGLPSRQKRQAP 470
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDP--GSAGRPKSGSTE---- 307
P + P P P P P P PP P G P GS P++G +
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Query: 306 TTSRPPRPLHWRESRSVPSPVG 241
T S PP P R++ P G
Sbjct: 332 TGSPPPPPRQKRQAPERSPPTG 353
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVP 253
P G P + GRP GS T S PP L R+ R P
Sbjct: 423 PTGSPPT-GRPPRGSPPTGS-PPTGLPSRQKRQAP 455
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K+G+ P RP
Sbjct: 112 PAGTPGKPGRPGKAGAPGLPGNPGRP 137
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = -1
Query: 474 LEPAQCCHPNPKPG*YRPAAPLSRRLSPML-----QVLDPPI--EVPAGDPGSAGRPKSG 316
+ P+Q + +P+P Y P + SPM+ ++ PP VP PG P G
Sbjct: 105 MNPSQTSNNSPRPQAYPPGQQNAFNRSPMMPNGTPNMMSPPSMGRVPGPSPGGPQPPGPG 164
Query: 315 STETTSRPPRP 283
+ RP +P
Sbjct: 165 QPQ--MRPGQP 173
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = -1
Query: 474 LEPAQCCHPNPKPG*YRPAAPLSRRLSPML-----QVLDPPI--EVPAGDPGSAGRPKSG 316
+ P+Q + +P+P Y P + SPM+ ++ PP VP PG P G
Sbjct: 105 MNPSQTSNNSPRPQAYPPGQQNAFNRSPMMPNGTPNMMSPPSMGRVPGPSPGGPQPPGPG 164
Query: 315 STETTSRPPRP 283
+ RP +P
Sbjct: 165 QPQ--MRPGQP 173
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 368 PLKSRLATLVRPAGRSLAPPKPPPDHP 288
P+ S T P S APP PPP +P
Sbjct: 297 PVYSPPRTTYVPRSTSAAPPNPPPQNP 323
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Frame = -1
Query: 453 HPNPKPG*YRPAAPLSR-RLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRPPRPLH 277
+PNPKP P + P ++ P P P PK P+P H
Sbjct: 234 NPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKH 293
Query: 276 WRESRSVPSP 247
SR P+P
Sbjct: 294 KPNSRPKPNP 303
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 25.4 bits (53), Expect(2) = 6.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1
Query: 351 GDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
G PG AG+P S S+E P P R P G G
Sbjct: 209 GQPGQAGQPGSSSSEPGQ--PGPNGQPGPRGPPGQAGSPG 246
Score = 20.6 bits (41), Expect(2) = 6.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 357 PAGDPGSAGRP 325
PAG+PG G P
Sbjct: 162 PAGEPGHDGAP 172
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 372 PPIEVPAGDPGSAGRPK-SGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
P P G PG G P G + +H E+ +P P GEAG
Sbjct: 105 PGARGPQGAPGLPGAPGVDGKPGVDGKSLTYVHAAEADCIPCPGGEAG 152
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 441 KPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKS 319
+PG P L+ M++ D I+ PAG PG G P S
Sbjct: 118 EPGASGPHGMSGSELTKMMRNDDTCIKCPAGPPGPRGAPGS 158
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.2
Identities = 25/79 (31%), Positives = 30/79 (37%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRPP 289
PAQ CHP P P P P P P G+ G+ G+P G S P
Sbjct: 143 PAQPCHPITPP----PCRPC-----PQGPPGAPGSPGPQGNAGAPGQPGHGG---GSGAP 190
Query: 288 RPLHWRESRSVPSPVGEAG 232
P + R P G+AG
Sbjct: 191 GPAGPKGQRGAPGHPGQAG 209
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRP 283
PAG PG GRP K G+ P RP
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRP 132
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 375 DPPIEVPAGDPGSAGRPKSGSTETTSRP 292
+PPI++ +G P S +P SGS + +P
Sbjct: 39 EPPIQI-SGKPASTAKPTSGSPQHHPQP 65
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +1
Query: 118 CFGPH-TASVCTHQQLCPNCNGRHHALLCLENSVIR 222
C PH C + C C G+HH+ C + R
Sbjct: 734 CLNPHHDIKKCRSYRSCAYCMGKHHSGACPKKEYYR 769
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +1
Query: 118 CFGPH-TASVCTHQQLCPNCNGRHHALLCLENSVIR 222
C PH C + C C G+HH+ C + R
Sbjct: 695 CLNPHHDIEKCRSYRSCAYCMGKHHSGACPKKEYYR 730
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -1
Query: 351 GDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
G PG+ G+P SG+ + PP P P G+ G
Sbjct: 216 GPPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPG 255
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPP 289
P G PG AG+P S T+ PP
Sbjct: 263 PKGPPGPAGQPGSDGNPGTAGPP 285
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = -1
Query: 357 PAGDPGSAGRP-KSGSTETTSRPPRPLHWRES---RSVPSPVGEAGWLRP 220
PAG PG+ G P G TT+ P S + P P G AG P
Sbjct: 113 PAGQPGTPGAPGPKGQDSTTTFAPINCPTAPSDCIKCAPGPAGPAGSAGP 162
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 535 PTVLQDRSTILPCAPEYNNRARASTVLPSESKTWLVPARSTTLQAPL 395
P+ R T+ P P+ N+ S S TW VP R TT+ + +
Sbjct: 323 PSSSSSRRTVTPKRPQTND----SVSTRRSSTTWEVPIRPTTMNSQI 365
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -1
Query: 357 PAGDPGSAGRPKSGSTETTSRPPRPLHWRE--SRSVPSPVGEAG 232
P G PGS G P P PL E + P P G+AG
Sbjct: 193 PPGPPGSPGAPGEPGRPGDDAPSEPLIPGEPGPQGPPGPPGQAG 236
>AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical
protein Y60A3A.19b protein.
Length = 255
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 398 RRLESGAAGRY*PGFGFGW 454
RR +GAAG++ GFGW
Sbjct: 56 RRTNAGAAGKFMENSGFGW 74
>AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical
protein Y60A3A.19a protein.
Length = 228
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 398 RRLESGAAGRY*PGFGFGW 454
RR +GAAG++ GFGW
Sbjct: 56 RRTNAGAAGKFMENSGFGW 74
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +1
Query: 118 CFGPH-TASVCTHQQLCPNCNGRHHALLCLENSVIR 222
C PH C + C C G+HH+ C + R
Sbjct: 695 CLNPHHDIEKCRSYRSCAYCMGKHHSGACPKKEYYR 730
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +3
Query: 234 QPRRPVRVPIVTLANVEAWVVGRWFRWSQTSAGRPNQGRQPGLQWEDLALEASGRGAWRV 413
Q RP + +LA+VE W G W + + Q + ++ A +
Sbjct: 10 QDERPTTTQLPSLASVEFWHSGNREDWMHALSAECQRLLQ---RSDETASTQQHQPRGSS 66
Query: 414 VLRAGTSQVLDSDGNTVLA 470
L+A T+Q+LDS T ++
Sbjct: 67 ELQASTTQLLDSSSQTEIS 85
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -1
Query: 411 LSRRLSPMLQVLDPP-IEVPAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPV 244
L L+ + DPP I PG++ P RPP P W++ +P +
Sbjct: 49 LRLNLNETISSQDPPGIGFIEVSPGTSMSPPQRHAPPPPRPPPPAGWKQHPVIPERI 105
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -1
Query: 411 LSRRLSPMLQVLDPP-IEVPAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPV 244
L L+ + DPP I PG++ P RPP P W++ +P +
Sbjct: 49 LRLNLNETISSQDPPGIGFIEVSPGTSMSPPQRHAPPPPRPPPPAGWKQHPVIPERI 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,656,053
Number of Sequences: 27780
Number of extensions: 403294
Number of successful extensions: 2346
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 1684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2288
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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