Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0455
(570 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.53
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 24 0.92
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 1.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 4.9
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 6.5
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 6.5
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 6.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 6.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 6.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 8.6
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.0 bits (52), Expect = 0.53
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 365 LKSRLATLVRPAGRSLAPPKPPP 297
+ S +TL R A R PP PPP
Sbjct: 1338 IDSDYSTLERTAWRQQQPPPPPP 1360
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 24.2 bits (50), Expect = 0.92
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 553 NCK*DCPTVLQDRSTILPCAPEYNNRARAST 461
NC D +D LP PEYNN ST
Sbjct: 66 NC--DSSKFEEDLMNKLPTTPEYNNHLYGST 94
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 455 AIRIQNLASTGPQHHSPGA 399
A+ + N A + PQ H PGA
Sbjct: 699 ALELMNRAVSVPQSHQPGA 717
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 73 LMRVDRNFDTMIRMPAFMQPRAE 5
L ++R TM +MP QPR E
Sbjct: 724 LTSLERTQPTMSQMPPTAQPRME 746
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 179 VGTMPCCAWKI 211
+G PCC WKI
Sbjct: 483 IGYYPCCWWKI 493
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.4 bits (48), Expect = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 179 VGTMPCCAWKI 211
+G PCC WKI
Sbjct: 536 IGYYPCCWWKI 546
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 130 HTASVCTHQQLCPNCNGRH 186
H ++ TH QLCP H
Sbjct: 371 HYSNGQTHSQLCPTPRSTH 389
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 406 GEWCCGPVLARFWIRMATLC 465
G+W G L + W+ LC
Sbjct: 100 GKWIFGIHLCKLWLTCDVLC 119
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 406 GEWCCGPVLARFWIRMATLC 465
G+W G L + W+ LC
Sbjct: 100 GKWIFGIHLCKLWLTCDVLC 119
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 406 GEWCCGPVLARFWIRMATLC 465
G+W G L + W+ LC
Sbjct: 100 GKWIFGIHLCKLWLTCDVLC 119
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 309 ETTSRPPRPLHWRES 265
+ T PP PL WR +
Sbjct: 333 DVTGTPPPPLVWRRN 347
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 219 TGAASQPRRPVRVPIVTLA 275
+G P RP RVP V L+
Sbjct: 1360 SGGRPVPERPERVPTVDLS 1378
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 317 APPKPPPDHPG 285
APP PPP G
Sbjct: 342 APPPPPPSSSG 352
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,127
Number of Sequences: 438
Number of extensions: 4701
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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