Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0450
         (414 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    26   0.13 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    25   0.39 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.8  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 242 LVQICKMAQVYPHPAPEGCTSASSESAPSDQPIYPDTG 355
           L  + ++  VYP+     C   + E++ SD P +P  G
Sbjct: 182 LETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 24.6 bits (51), Expect = 0.39
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 55  GHEKIRDLNRIPKFRRKP 2
           G  K + L R+PKF++KP
Sbjct: 207 GPHKFQPLLRLPKFKKKP 224


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 272 YPHP--APEGCTSASSESAPSDQPIYPDTG 355
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 172 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 201


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +2

Query: 272 YPHP--APEGCTSASSESAPSDQPIYPDTG 355
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 64  YPYPILSPEMSQVAASWHTPSMYPLSPGAG 93


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 305  ASSESAPSDQPIYPD 349
            ASS  APS  P+ PD
Sbjct: 2288 ASSTMAPSTTPMVPD 2302


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 269 LGPSYKSGQVTSWLNALTNSKVLWPLLE 186
           +  + K G   + + A  +S V+WPL+E
Sbjct: 211 INENLKMGLDIASITAQASSFVVWPLVE 238


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 269 LGPSYKSGQVTSWLNALTNSKVLWPLLE 186
           +  + K G   + + A  +S V+WPL+E
Sbjct: 211 INENLKMGLDIASITAQASSFVVWPLVE 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,561
Number of Sequences: 336
Number of extensions: 1608
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)