Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0450
         (414 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894...   117   3e-27
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341...   117   3e-27
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892...   102   1e-22
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198...    31   0.36 
07_03_1414 - 26403361-26403969                                         29   1.5  
07_03_1422 + 26462871-26463434,26463772-26463897                       28   3.4  
07_03_1413 - 26396426-26396890                                         28   3.4  
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128...    28   3.4  
04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617...    27   5.9  
11_03_0212 - 11761856-11762037,11762302-11762398,11763571-117645...    27   7.8  
01_01_0697 - 5389071-5389487,5390301-5390390,5390472-5390536,539...    27   7.8  
01_01_0191 - 1669631-1669924                                           27   7.8  

>09_04_0677 -
           19388888-19389019,19389124-19389216,19389317-19389445,
           19389559-19389728,19390280-19390481,19390576-19390623,
           19390797-19390799
          Length = 258

 Score =  117 bits (282), Expect = 3e-27
 Identities = 51/77 (66%), Positives = 62/77 (80%)
 Frame = +3

Query: 177 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 356
           NPLFEKRPK F IG  + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 22  NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81

Query: 357 KTTAKGLFKILEKYRPE 407
           K  A  LFK+L KYRPE
Sbjct: 82  KNLATNLFKMLLKYRPE 98


>08_02_0211 -
           14333553-14333684,14333795-14333887,14334019-14334105,
           14334220-14334389,14334985-14335186,14335604-14335606
          Length = 228

 Score =  117 bits (282), Expect = 3e-27
 Identities = 51/77 (66%), Positives = 62/77 (80%)
 Frame = +3

Query: 177 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 356
           NPLFEKRPK F IG  + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+TLD
Sbjct: 6   NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 65

Query: 357 KTTAKGLFKILEKYRPE 407
           K  A  LFK+L KYRPE
Sbjct: 66  KNLATNLFKMLLKYRPE 82


>01_07_0018 -
           40488702-40488833,40488928-40489020,40489125-40489253,
           40489379-40489500,40490292-40490544,40490636-40490638
          Length = 243

 Score =  102 bits (245), Expect = 1e-22
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = +3

Query: 177 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 356
           NPLFEKRPK F IG  + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TLD
Sbjct: 23  NPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTLD 82

Query: 357 KTTAKGLFKILEKYRPETE 413
           K       ++L++ + E E
Sbjct: 83  KNLGCQKERLLKRAQAEAE 101


>06_03_0392 +
           20318728-20319309,20319596-20319725,20319844-20319895,
           20319995-20320061,20320547-20320633,20322526-20322567,
           20322635-20322740,20323155-20323219,20323299-20323343,
           20323442-20323549,20323636-20323723,20324147-20324193,
           20324355-20324363
          Length = 475

 Score = 31.1 bits (67), Expect = 0.36
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 275 PHPAPEGCTSASSESAPSDQP 337
           P PAPE   +A+ E+APSD P
Sbjct: 53  PQPAPEEAPAAAEEAAPSDDP 73


>07_03_1414 - 26403361-26403969
          Length = 202

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 287 ALDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHDLLGLNLFD 147
           AL A +  P +  G++  + + +T  + L P LEE +    GL L+D
Sbjct: 76  ALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122


>07_03_1422 + 26462871-26463434,26463772-26463897
          Length = 229

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -2

Query: 287 ALDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHDLLGLNLFD 147
           AL   +  P Y  G+V  + + +T  + L P LEE      GL L D
Sbjct: 74  ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120


>07_03_1413 - 26396426-26396890
          Length = 154

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -2

Query: 287 ALDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHDLLGLNLFD 147
           AL   +  P Y  G+V  + + +T  + L P LEE      GL L D
Sbjct: 28  ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74


>02_04_0587 +
           24110333-24110584,24111193-24111261,24112347-24112850,
           24113094-24113336
          Length = 355

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -1

Query: 222 PDQ*QSSLASSRREDSRSSWAQPF*PPMGRR 130
           P    SSLA +RR  +R   AQP  PP  RR
Sbjct: 24  PSSAASSLAFARRAAARPLRAQPLLPPAARR 54


>04_04_1357 +
           32860677-32860781,32861484-32861588,32861678-32861728,
           32861829-32861949,32862495-32862616,32863032-32863133,
           32863226-32863300,32863391-32863470,32863601-32863751,
           32863850-32864080,32864221-32864517,32864638-32864751,
           32864857-32865030
          Length = 575

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -2

Query: 257 YKSGQVTSWLNALTNSKVLWPLLEERIHDLLGLNLFDH 144
           YK+  V+  LN + N    + ++E+ +HD+L L ++DH
Sbjct: 477 YKTRVVSESLNPVWNQTFDF-VVEDGLHDMLMLEVYDH 513


>11_03_0212 -
           11761856-11762037,11762302-11762398,11763571-11764545,
           11766172-11766263,11766450-11766510
          Length = 468

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +3

Query: 204 NFAIGQGIQPTRDLSRFVRWPKYIRI-QRQKAVLQRRLKVPPP--INQFTQTLDK-TTAK 371
           N  +GQ  +    ++ +V+   Y  I Q+ + +L  RLK  PP    + TQ + K    K
Sbjct: 352 NSCMGQDEEVVNSINSYVKQKWYAEILQKDRKILTERLKKKPPAWTAKHTQAVKKIKNCK 411

Query: 372 GLFKILEK 395
               +L+K
Sbjct: 412 AAKDVLQK 419


>01_01_0697 -
           5389071-5389487,5390301-5390390,5390472-5390536,
           5391106-5391176,5391297-5391335,5392938-5393350
          Length = 364

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = -3

Query: 370 LAVVLSSV--WVNWLIGGGTFRRR 305
           LAV L S+  WV  L+GGG +RRR
Sbjct: 37  LAVALHSLLLWVFLLVGGGGWRRR 60


>01_01_0191 - 1669631-1669924
          Length = 97

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 379 KRPLAVVLSSVWVNWLIGGG 320
           +R LA++L   W  WL GGG
Sbjct: 12  RRRLALILCLAWALWLHGGG 31


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,967,739
Number of Sequences: 37544
Number of extensions: 208246
Number of successful extensions: 673
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)