Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0450
         (414 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   4.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   4.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.2  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   5.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.3  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       20   9.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 185 ERIHDLLGLNLFDHQWGGGY 126
           +RI  L G ++ DH +GGG+
Sbjct: 651 KRIVKLRG-SIIDHSYGGGF 669



 Score = 20.2 bits (40), Expect = 9.6
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -3

Query: 289 WRWMRIYLGHLTNL 248
           WRW+R+  G   ++
Sbjct: 59  WRWIRLTYGQTNHI 72


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 185 ERIHDLLGLNLFDHQWGGGY 126
           +RI  L G ++ DH +GGG+
Sbjct: 689 KRIVKLRG-SIIDHSYGGGF 707



 Score = 20.2 bits (40), Expect = 9.6
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -3

Query: 289 WRWMRIYLGHLTNL 248
           WRW+R+  G   ++
Sbjct: 97  WRWIRLTYGQTNHI 110


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 303 EVQPSGAGCGYTWAILQIWTS 241
           ++ P   G GY   +L  WT+
Sbjct: 92  KIAPIFKGIGYATCVLSCWTN 112


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 303 EVQPSGAGCGYTWAILQIWTS 241
           ++ P   G GY   +L  WT+
Sbjct: 145 KIAPIFKGIGYATCVLSCWTN 165


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 82  NSLLIQRFKGHEKIRDLNRIPKFRRKP 2
           NSL+ + +K H+K R L +      +P
Sbjct: 634 NSLMDEAYKPHKKFRALRQKDSAEAEP 660


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = -2

Query: 296 SLLALDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHDLLGLN 156
           S++A D  +L P    G   +   +L  S + W  +      L+G N
Sbjct: 7   SVIASDMAVLFPEKIIGLHNNMCTSLNLSNLFWLFVGTYFPSLIGAN 53


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 291 KAVLQRRLKVPPPINQFTQT 350
           +  L+ ++ VPP I QF+ T
Sbjct: 572 RGTLEVQVMVPPTIQQFSFT 591


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 PHPAPEGCTSASSESAP 325
           P PAPE    A +E+ P
Sbjct: 25  PEPAPEPEAEADAEADP 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,175
Number of Sequences: 438
Number of extensions: 1862
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)