Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0449
(626 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g36050.1 68414.m04479 expressed protein 127 7e-30
At1g22200.1 68414.m02776 expressed protein 123 8e-29
At3g22290.1 68416.m02816 expressed protein 59 2e-09
At3g20560.1 68416.m02603 thioredoxin family protein contains Pfa... 51 7e-07
At5g45330.1 68418.m05564 expressed protein ; expression supporte... 31 0.47
At3g52240.1 68416.m05741 expressed protein 31 0.83
At1g63670.1 68414.m07205 expressed protein 29 1.9
At2g32940.1 68415.m04038 PAZ domain-containing protein / piwi do... 29 2.5
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 29 3.3
At3g61680.1 68416.m06912 lipase class 3 family protein contains ... 28 5.8
At1g14350.1 68414.m01701 myb family transcription factor (MYB124... 28 5.8
At4g01570.1 68417.m00203 pentatricopeptide (PPR) repeat-containi... 27 7.7
At1g34110.1 68414.m04230 leucine-rich repeat transmembrane prote... 27 7.7
>At1g36050.1 68414.m04479 expressed protein
Length = 386
Score = 127 bits (306), Expect = 7e-30
Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
Frame = +1
Query: 142 MTQFIDKFKQLDAYAKTLEDFRVKXXXXXXXXXXXXXXMILLFMSELHTYLSPNISEELF 321
M ++K + LDAY K EDF + M LLF SEL YL +L
Sbjct: 1 MAGILNKLRNLDAYPKINEDFYSRTLSGGVITLLSSVVMFLLFFSELRLYLHTVTETKLI 60
Query: 322 VDTSRGHKLRINLDIIVPTISCNYLVLDAMDSSGEQHLQMEQNIHKRRLDLDGNAIEEPK 501
VDTSRG LRIN DI P ++C+ L +DAMD SGE HL ++ +I KRRLD +GN IE +
Sbjct: 61 VDTSRGETLRINFDITFPALACSILSVDAMDISGELHLDVKHDIIKRRLDSNGNTIEARQ 120
Query: 502 KEEIST--ASTLKQNNSEIA--TLTCGSCYGAAFNESQCCNTCDD 624
+T + L+++ + CGSCYGA E CCN+C+D
Sbjct: 121 DGIGATKIENPLQKHGGRLGHNETYCGSCYGAEAEEHDCCNSCED 165
>At1g22200.1 68414.m02776 expressed protein
Length = 386
Score = 123 bits (297), Expect = 8e-29
Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
Frame = +1
Query: 142 MTQFIDKFKQLDAYAKTLEDFRVKXXXXXXXXXXXXXXMILLFMSELHTYLSPNISEELF 321
M +++ + LDAY K EDF + M++LF SEL Y+ P +L
Sbjct: 1 MVGVMNRLRNLDAYPKINEDFYRRTLSGGVITLASSIVMLILFFSELQLYIHPVTETQLR 60
Query: 322 VDTSRGHKLRINLDIIVPTISCNYLVLDAMDSSGEQHLQMEQNIHKRRLDLDGNAIEEPK 501
VDTSRG KLRIN D+ P + C+ + LD+MD SGE+HL + +I KRRLD GN I E K
Sbjct: 61 VDTSRGEKLRINFDVTFPALQCSIISLDSMDISGERHLDVRHDIIKRRLDSSGNVI-EAK 119
Query: 502 KEEISTASTLKQNNSEIATLT-----CGSCYGAAFNESQCCNTCDD 624
++ I K L CGSC+GA ++ CCN+C++
Sbjct: 120 QDGIGHTKIEKPLQKHGGRLEHNETYCGSCFGAEASDDACCNSCEE 165
>At3g22290.1 68416.m02816 expressed protein
Length = 354
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/108 (28%), Positives = 55/108 (50%)
Frame = +1
Query: 166 KQLDAYAKTLEDFRVKXXXXXXXXXXXXXXMILLFMSELHTYLSPNISEELFVDTSRGHK 345
+ +DA+ + + K M LF+ EL YL+ ++ VD RG
Sbjct: 8 RSIDAFPRAEDHLLQKTQSGAVVSIVGLLIMATLFLHELSYYLNTLTVHQMSVDLKRGET 67
Query: 346 LRINLDIIVPTISCNYLVLDAMDSSGEQHLQMEQNIHKRRLDLDGNAI 489
L I++++ P++ C+ L +DA+D SG+ + ++ NI K RL+ G+ I
Sbjct: 68 LPIHVNMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHII 115
>At3g20560.1 68416.m02603 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 483
Score = 50.8 bits (116), Expect = 7e-07
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +1
Query: 160 KFKQLDAYAKTLEDFRVKXXXXXXXXXXXXXXMILLFMSELHTYLSPNISEELFVD-TSR 336
K K +D Y K D M+ LF EL +YL N + + VD +S
Sbjct: 6 KLKSVDFYRKIPRDLTEASLSGAGLSIVAALFMMFLFGMELSSYLEVNTTTAVIVDKSSD 65
Query: 337 GHKLRINLDIIVPTISCNYLVLDAMDSSGEQHLQMEQNIHKRRLD 471
G LRI+ +I P +SC + +D D G L + + + K +D
Sbjct: 66 GDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFPID 110
>At5g45330.1 68418.m05564 expressed protein ; expression supported
by MPSS
Length = 571
Score = 31.5 bits (68), Expect = 0.47
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 310 EELFVDTSRGHKLRINLDIIVPTISCNYLVLDAMDSSGEQHLQMEQNIHKRRL-DLDGNA 486
EE ++ + K N D TISCN LD + SG+QH Q + H R++ + GN
Sbjct: 462 EETAIEPNAEGKPAYNKDDFFDTISCNQ--LDRVARSGQQHNQFPE--HMRQVPEAFGNN 517
Query: 487 IEEP 498
+ P
Sbjct: 518 FQRP 521
>At3g52240.1 68416.m05741 expressed protein
Length = 680
Score = 30.7 bits (66), Expect = 0.83
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 400 LDAMDSSGEQHLQMEQNIHKRRLDLDGNAIEEPKKEEISTASTLKQNNSEIATLTCGSCY 579
LD D + E N K + L G+ + ++ S A+ + S TL+ GS
Sbjct: 268 LDLCDVGNHSDVTDESNGEKAQSPLQGSTVVPSLRDTRSIANEVDFRES-FETLSHGSPD 326
Query: 580 GAAFNESQCCNTC 618
+ + +CCN+C
Sbjct: 327 NSVTSPDKCCNSC 339
>At1g63670.1 68414.m07205 expressed protein
Length = 689
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 400 LDAMDSSGEQHLQMEQNIH----KRRLDLDGNAIEEPKKEEISTASTL 531
LD + S+ E + + Q+ H K+ LDL+G+ ++EP+ + S A L
Sbjct: 207 LDILSSNKELFITLLQDPHSFSAKKSLDLEGSKVKEPRDKSPSMADDL 254
>At2g32940.1 68415.m04038 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|O04379 Argonaute
protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
protein (ZWILLE protein) {Arabidopsis thaliana};
contains Pfam profiles PF02171: Piwi domain, PF02170:
PAZ domain
Length = 878
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 403 DAMDSSGEQHLQMEQNIHKRRLDLDGNAIEEPKKEEISTASTLKQNNSEIATLTCGS 573
DA+D +G M+Q DLDG + ++ + T L QN + + GS
Sbjct: 70 DAVDGTGISRKLMDQLFKTYSSDLDGKRLAYDGEKTLYTVGPLPQNEFDFLVIVEGS 126
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 328 TSRGHKLRINLDIIVPTISCNYLVLDAMDSSGEQHLQMEQNIHKRRLDLDGNA 486
T G +++D + C +L A D +GEQH + +HK D NA
Sbjct: 315 TRAGTDAVVSIDDAKEALQCKHL---AYDKAGEQHYNLISALHKSMRGGDANA 364
>At3g61680.1 68416.m06912 lipase class 3 family protein contains
Pfam profile PF01764: Lipase
Length = 649
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +1
Query: 304 ISEELFVDTSRGHKLRINLDIIVPTISCNY-----LVLDAMDSSGEQHLQMEQN 450
I EL +D S H + ++ DI+ SCNY LVL ++ S H + +N
Sbjct: 464 ILAELGLDESHVHCVMMHRDIVPRAFSCNYPDHVALVLKRLNGSFRTHPCLNKN 517
>At1g14350.1 68414.m01701 myb family transcription factor (MYB124)
contains PFAM profile: PF00249 myb-like DNA binding
domain
Length = 436
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/44 (45%), Positives = 21/44 (47%)
Frame = +1
Query: 457 KRRLDLDGNAIEEPKKEEISTASTLKQNNSEIATLTCGSCYGAA 588
KR L LDG I P+K E T K S I LT S YG A
Sbjct: 140 KRMLFLDG--ISTPRKSENETPIAKKLKRSHILDLTEISNYGRA 181
>At4g01570.1 68417.m00203 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 805
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 259 ILLFMSELHTYLSPNISEELFVDTSRGHKLRINLDII 369
+L +M EL L+P++ + + + + H+LR+ L I+
Sbjct: 149 VLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSIL 185
>At1g34110.1 68414.m04230 leucine-rich repeat transmembrane protein
kinase, putative contains similarity to receptor protein
kinase-like protein GI:10177178 from [Arabidopsis
thaliana]
Length = 1045
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 382 SCNYLVLDAMDSSGEQHLQMEQNIHKRRLDLDGNAIEEPKKEEISTASTLK 534
S +L L + + SG + H R LDL N++ P E+ STL+
Sbjct: 73 SLQFLNLSSTNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQ 123
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,564,107
Number of Sequences: 28952
Number of extensions: 199278
Number of successful extensions: 479
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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