Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0448
         (603 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   2.5  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   4.4  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   4.4  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 189 KLQFKLWVLRFCLKIVYPKFNF 254
           + +F+L  L FCL +V PK  F
Sbjct: 32  RYKFRLAFLSFCLLVVIPKVAF 53


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 222 CLKIVYPKFNFYTFLVFL 275
           C+++ +PKF  Y  +V++
Sbjct: 102 CIRVSFPKFRLYVGIVYV 119


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 264  LVFLTIKHRIWYERRLRGAKI 326
            ++ L+I  R+ Y R+LR AKI
Sbjct: 1748 VIGLSISQRLSYRRQLRAAKI 1768


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,672
Number of Sequences: 2352
Number of extensions: 11715
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)