Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0448
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023892-1|ABA81826.1|  510|Drosophila melanogaster LP20791p pro...    28   8.5  
AY119478-1|AAM50132.1|  469|Drosophila melanogaster GH06222p pro...    28   8.5  
AE014134-1716|AAO41179.1|  510|Drosophila melanogaster CG13124-P...    28   8.5  
AE014134-1715|AAF52823.3|  510|Drosophila melanogaster CG13124-P...    28   8.5  

>BT023892-1|ABA81826.1|  510|Drosophila melanogaster LP20791p
           protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 168 FIRNMINKLQFKLWVLRFCLKIVYPKFNFYTFLVFLTIKHRIWYERR 308
           FI+  +   +F L + R CL I+  +    TFL  L    R WY+ R
Sbjct: 318 FIKRAVESRRFALPISRLCLNII-AREQKETFLEALLNTCRQWYQER 363


>AY119478-1|AAM50132.1|  469|Drosophila melanogaster GH06222p
           protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 168 FIRNMINKLQFKLWVLRFCLKIVYPKFNFYTFLVFLTIKHRIWYERR 308
           FI+  +   +F L + R CL I+  +    TFL  L    R WY+ R
Sbjct: 277 FIKRAVESRRFALPISRLCLNII-AREQKETFLEALLNTCRQWYQER 322


>AE014134-1716|AAO41179.1|  510|Drosophila melanogaster CG13124-PB,
           isoform B protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 168 FIRNMINKLQFKLWVLRFCLKIVYPKFNFYTFLVFLTIKHRIWYERR 308
           FI+  +   +F L + R CL I+  +    TFL  L    R WY+ R
Sbjct: 318 FIKRAVESRRFALPISRLCLNII-AREQKETFLEALLNTCRQWYQER 363


>AE014134-1715|AAF52823.3|  510|Drosophila melanogaster CG13124-PA,
           isoform A protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 168 FIRNMINKLQFKLWVLRFCLKIVYPKFNFYTFLVFLTIKHRIWYERR 308
           FI+  +   +F L + R CL I+  +    TFL  L    R WY+ R
Sbjct: 318 FIKRAVESRRFALPISRLCLNII-AREQKETFLEALLNTCRQWYQER 363


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,747,081
Number of Sequences: 53049
Number of extensions: 439632
Number of successful extensions: 976
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)