Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0447
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   5.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.3  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   9.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   9.6  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 75  ERWTSRVTPH 104
           ERWT+  TPH
Sbjct: 442 ERWTTPTTPH 451


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 40  WFSPTNRPPRAEF 2
           W SP NR P  +F
Sbjct: 68  WLSPINRSPMVDF 80


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 327 TREATNRIGLLTHEFLLDVLSDLSIVEEVAVFSD 226
           + E+ N  GL    FL +V+SD   + +   F D
Sbjct: 802 SEESINNQGLECLRFLNEVISDFDAILDQNKFKD 835


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 212 EENPLGQAASACH 174
           E  P+G+A S CH
Sbjct: 700 EPQPIGKALSKCH 712


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 366 VVLGYEPLEVRGVTREATNRIGLLTHEFL 280
           VV+ YEP+   G  + AT +     HE L
Sbjct: 159 VVVAYEPVWAIGTGKTATPQQAQEVHEKL 187


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 104 VWCDSRSPSLPPLLV 60
           VW  +   SLPPLL+
Sbjct: 165 VWLGAACISLPPLLI 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,735
Number of Sequences: 438
Number of extensions: 2771
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)