Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0443
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   1.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.0  

>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 138 IAAILW-LKYCDSSYLYTFIILPFKM-DKLNASV 43
           I   +W  + C S++ Y FI+L F + +K N S+
Sbjct: 333 ITRTMWYFQICGSAFSYLFIMLQFDLNNKKNQSL 366


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 162 LVA*VFSAIAAILWLKYCDS 103
           L A V SAIA  L+L  CDS
Sbjct: 5   LTACVGSAIAGFLFLLICDS 24


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -1

Query: 111 CDSSYLYTFIILPFKM-DKLNASV 43
           C S++ Y FI+L F + +K N S+
Sbjct: 358 CGSAFSYLFIMLQFDLNNKKNQSL 381


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 28   IVYTLHTRIEFVHFKWEY 81
            IV+ L  + +++H KW +
Sbjct: 1282 IVFLLTLKKDYLHIKWPF 1299


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 28   IVYTLHTRIEFVHFKWEY 81
            IV+ L  + +++H KW +
Sbjct: 1282 IVFLLTLKKDYLHIKWPF 1299


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 343 VAHIASDKSGATENCGY 293
           +A  ASD    TENC Y
Sbjct: 58  LAFDASDPKFLTENCDY 74


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 343 VAHIASDKSGATENCGY 293
           +A  ASD    TENC Y
Sbjct: 58  LAFDASDPKFLTENCDY 74


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
          protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +3

Query: 30 CIHITHSH 53
          C+H+ HSH
Sbjct: 13 CLHVQHSH 20


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 386 LCMVKLTGYQFF 351
           +C+V L  YQFF
Sbjct: 22  VCLVPLNPYQFF 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,534
Number of Sequences: 336
Number of extensions: 2715
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)