Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0442
         (578 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748...    29   2.7  
11_03_0068 + 9564354-9565180,9566658-9568704                           29   3.5  
01_06_0653 + 30891231-30891276,30891624-30892898,30893775-30893878     29   3.5  
05_01_0488 - 4070506-4072277,4072455-4072557                           27   8.2  

>08_01_0774 +
           7482311-7482919,7484012-7484077,7484211-7484384,
           7484473-7484603,7484726-7484802,7484981-7485064,
           7487885-7488066,7488189-7488266,7489813-7489945,
           7491610-7491670,7491861-7491942,7492143-7492271,
           7492510-7492653,7493102-7493204,7493382-7493513,
           7494127-7494485,7495149-7495229,7495384-7495450,
           7495636-7495706,7496087-7496178,7496365-7496458,
           7497692-7497789,7498206-7498341,7498599-7498618,
           7498781-7498876,7498973-7499060,7499171-7499288,
           7499738-7499759,7500203-7500326,7500625-7500702,
           7500837-7500955,7501816-7501869,7502260-7502362,
           7503133-7503261,7503345-7503453,7503788-7503819
          Length = 1424

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -2

Query: 214 DLYSEKAYNNDETFHQYVRNYSKLFRKVCLAAKSLHLSDLIKNA 83
           + Y+E   N+ + +  Y  ++ + FR +C++AK   +  L+K A
Sbjct: 581 EYYAEDKGNSSQIWRLYWASHQRFFRHMCMSAKVPAVVRLVKEA 624


>11_03_0068 + 9564354-9565180,9566658-9568704
          Length = 957

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/72 (22%), Positives = 34/72 (47%)
 Frame = -2

Query: 310 DVFIPKTVTLKNKTVFSEWATTGVYKSRKKLYDLYSEKAYNNDETFHQYVRNYSKLFRKV 131
           D  +P T+ L +      + +T         + L +    +ND+  + Y+R+  +LF+  
Sbjct: 546 DAILPATMVLSSARSLVVYGSTEHIPLISAFHVLRTIAIESNDKLKNCYLRDIGRLFQLK 605

Query: 130 CLAAKSLHLSDL 95
           CL  + + +S+L
Sbjct: 606 CLRLREVGISEL 617


>01_06_0653 + 30891231-30891276,30891624-30892898,30893775-30893878
          Length = 474

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
 Frame = -2

Query: 415 SLEIILSQEHSEIIYNKNPNLSYQNMFE-RINMVFTDVFIPKTVTLKNKTVFSEWATTGV 239
           SL   L    S+ + + N  L Y NMF+ +I+ +F  +      TLK     + W   G 
Sbjct: 210 SLNYALFSPQSQDVIDPNTGLVYTNMFDAQIDSIFFALMALNFKTLKIMVTETGWPNKGA 269

Query: 238 YKSRKKLYDLYSEKAYNNDETFH 170
            K      D  + + YN +   H
Sbjct: 270 AKETGATPD--NAQTYNTNLIRH 290


>05_01_0488 - 4070506-4072277,4072455-4072557
          Length = 624

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
 Frame = -2

Query: 415 SLEIILSQEHSEI--IYNK--NPNLSYQNMFERINMVFTDVFIPKTVTLKNKTVFSEWAT 248
           SLE  L+   +E+  +Y++  N +L+ +    R+N    +V     + L  K++     T
Sbjct: 460 SLEAKLASVEAELKQVYDEKANESLNSEKEISRLNQELANVKTDLELLLSEKSLVDNKVT 519

Query: 247 TGVYKSRKKLYDLYSEKAYNNDETFHQYVRNYSKLFRKVCLAAKSL 110
           T +     +      EK    D+  +Q    +SKL  +  LA KSL
Sbjct: 520 TLLTDITTR-----DEKMKQMDDQLNQLQLEHSKLMAQADLARKSL 560


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,856,421
Number of Sequences: 37544
Number of extensions: 252997
Number of successful extensions: 678
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)