Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0442
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-17|CAB54456.2|  177|Caenorhabditis elegans Hypothetical p...    32   0.26 
AL021473-1|CAA16305.1|  570|Caenorhabditis elegans Hypothetical ...    30   1.4  
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z81124-9|CAB03379.2|  328|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z48621-10|CAA88539.1|  225|Caenorhabditis elegans Hypothetical p...    28   5.5  
AF286218-1|AAF88063.1|  225|Caenorhabditis elegans VAB-15 protein.     28   5.5  
AF078787-3|AAC26951.1|  335|Caenorhabditis elegans Hypothetical ...    28   5.5  
AF078785-6|AAC27094.1|  337|Caenorhabditis elegans Serpentine re...    28   5.5  
AC025724-8|AAG23381.1|  460|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z81544-4|CAB04431.2|  329|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr...    27   9.6  
L15314-2|AAF99983.1|  322|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AF002198-5|AAF99934.2|  329|Caenorhabditis elegans Serpentine re...    27   9.6  

>Z99281-17|CAB54456.2|  177|Caenorhabditis elegans Hypothetical
           protein Y57G11C.33 protein.
          Length = 177

 Score = 32.3 bits (70), Expect = 0.26
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
 Frame = -2

Query: 418 RSLEIILSQEHSEIIYNKNPNLSYQNMFERINMVFTD--VFIPKTVTLKNKTVFSEWATT 245
           + L++    E+   +  K P   ++N   RIN +F D     P+T+       F+ +A+ 
Sbjct: 48  KGLDVQFEAEYPARLTEKVPRDVWENTIVRINRIFADAEAITPQTIFETVLGCFTCYASY 107

Query: 244 GVYKS--RKKLYDLYSEKAYNNDETFHQ---YVRN 155
            + KS  R+KL +L       N E +H    ++RN
Sbjct: 108 AITKSTYRRKLDELQEFLNRENREIYHHVGFHIRN 142


>AL021473-1|CAA16305.1|  570|Caenorhabditis elegans Hypothetical
           protein Y20C6A.2 protein.
          Length = 570

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 163 HIDEMFHHYYKLFQSTDHTIFFY 231
           H  E+F HY K+F   DHT+  Y
Sbjct: 89  HFQEVFWHYKKIFIEIDHTVTDY 111


>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
           protein T20F7.5 protein.
          Length = 1065

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 403 ILSQEHSEIIYNKNPNLSYQNMFERINMVFTDVFIPK 293
           I  ++H E +   + N S Q   E  NMV  D F+P+
Sbjct: 371 ISKEDHDETLEFNDENCSKQQTEEETNMVKIDYFVPE 407


>Z81124-9|CAB03379.2|  328|Caenorhabditis elegans Hypothetical
           protein T21B4.12 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -2

Query: 418 RSLEIILSQEHSEIIYNKNPNLSYQNMFERINMVFTDVFIPKTVTLKNKTVFSE 257
           +S+ II+   +S I YN  PNL +Q +    +MVF        V   N+T+  E
Sbjct: 238 QSILIIVDSLNSTITYNLFPNLFFQFITLSFSMVFLRTLEGFVVFSINETINEE 291


>Z48621-10|CAA88539.1|  225|Caenorhabditis elegans Hypothetical
           protein R07B1.1 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -1

Query: 521 LTSDHSGQFVSFESIMNSKDKNTLVTVPINKKRIEKFRNNIKPRT 387
           L+  HS Q++S +   +    +  + + ++K  + K +NN KPRT
Sbjct: 90  LSMQHSLQWLSSQREDSPTSDDAKIQIGLSKCMLRKHKNNRKPRT 134


>AF286218-1|AAF88063.1|  225|Caenorhabditis elegans VAB-15 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -1

Query: 521 LTSDHSGQFVSFESIMNSKDKNTLVTVPINKKRIEKFRNNIKPRT 387
           L+  HS Q++S +   +    +  + + ++K  + K +NN KPRT
Sbjct: 90  LSMQHSLQWLSSQREDSPTSDDAKIQIGLSKCMLRKHKNNRKPRT 134


>AF078787-3|AAC26951.1|  335|Caenorhabditis elegans Hypothetical
           protein T17A3.4 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 210 CTLKKLIIMMKHFINMSGTIPNYLE 136
           C LK+L + +KH+IN S     YLE
Sbjct: 235 CPLKQLCLFLKHWINGSNDRLEYLE 259


>AF078785-6|AAC27094.1|  337|Caenorhabditis elegans Serpentine
           receptor, class x protein121 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 418 RSLEIILSQEHSEIIYNKNPNLSYQNMFERINMVF 314
           +S+ II+   +S I YN  PNL +Q +    +MVF
Sbjct: 240 QSILIIIDSLNSSITYNMFPNLIFQFITLSFSMVF 274


>AC025724-8|AAG23381.1|  460|Caenorhabditis elegans Hypothetical
           protein Y67D8C.2 protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 563 FTNVTPINKKIINQLTSDHSGQFVSFESIMNSKDKNTLVTVPINKKRIEKFRN 405
           F NVT    K    + +DHS  +   E + + K K+T +  P+N   +E F+N
Sbjct: 209 FENVTDSCIKSYG-IDNDHSENYFEREKV-DQKAKDTYLGPPLNSNILENFQN 259


>Z81544-4|CAB04431.2|  329|Caenorhabditis elegans Hypothetical
           protein F49C5.2 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 418 RSLEIILSQEHSEIIYNKNPNLSYQNMFERINMVF 314
           +S+ II+   +S I YN  PNL +Q +    +MVF
Sbjct: 240 QSILIIVDSLNSTITYNMFPNLFFQFITLSFSMVF 274


>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
           protein C31E10.8 protein.
          Length = 1272

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 309 SVKTILILSNIFWYDKFGFLL*IISECSWLNIISKLLNSFFINRNSHKS 455
           S+ T+  L    + D FGF +    E + L+ ++  LN F+ NR+   S
Sbjct: 298 SLPTLQSLLQGIYVDSFGFRISFKEEPNALHYMATKLNHFYANRSKSAS 346


>L15314-2|AAF99983.1|  322|Caenorhabditis elegans Hypothetical
           protein K06H7.7 protein.
          Length = 322

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 226 KKLYDLYSEKAYNNDETFHQYVRNYSKLFRKVCLAAKSLHL 104
           +K+YDLY +         +    +  K+F K  L +KSLHL
Sbjct: 251 EKMYDLYQKMMRGQSSRMYTEWFDKCKIFVKNFLFSKSLHL 291


>AF002198-5|AAF99934.2|  329|Caenorhabditis elegans Serpentine
           receptor, class x protein122 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 418 RSLEIILSQEHSEIIYNKNPNLSYQNMFERINMVF 314
           +S+ II+   +S I YN  PNL +Q +    +MVF
Sbjct: 240 QSILIIVDSLNSTITYNMFPNLFFQFITLSFSMVF 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,936,776
Number of Sequences: 27780
Number of extensions: 267664
Number of successful extensions: 870
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)