Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0441
(556 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0111 - 12638078-12639328,12640886-12641146 208 2e-54
05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571 188 3e-48
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 105 2e-23
05_01_0413 - 3253345-3253461,3253595-3253666,3253763-3253876,325... 103 7e-23
02_05_1191 + 34856635-34856775,34856878-34856942,34857096-348571... 83 1e-16
03_01_0439 + 3409422-3409795,3410672-3410897,3411004-3411282,341... 66 2e-11
10_08_0003 - 13992276-13992311,13992461-13992598,13992682-139928... 65 4e-11
07_03_1550 + 27641099-27641288,27641433-27641646,27641738-276418... 38 0.007
10_08_0354 - 17104223-17106061,17106770-17106794,17107317-171075... 34 0.066
10_08_0359 - 17167829-17169595,17169976-17169996 34 0.088
02_01_0675 - 5028910-5030379 34 0.088
10_08_0357 - 17158414-17160150,17160534-17160710 33 0.12
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 33 0.12
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 31 0.62
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 31 0.62
03_02_0314 + 7398247-7400877 29 2.5
05_06_0218 + 26475951-26476252,26476361-26476522,26476769-26476970 29 3.3
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 29 3.3
04_04_0047 + 22346962-22347437,22347874-22348036,22348143-223482... 29 3.3
01_01_0028 + 209283-209563,209659-209890,210015-210160,210694-21... 29 3.3
02_05_1061 - 33825948-33825995,33826094-33826243,33827154-338273... 28 4.4
02_05_0502 + 29569563-29570487,29570548-29570621 28 4.4
02_05_0463 - 29248675-29249391,29250024-29250142,29250276-292504... 28 4.4
06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426... 28 5.8
07_03_1631 - 28258897-28259984,28260518-28260772,28260861-282609... 27 7.6
06_02_0181 - 12694304-12694398,12694512-12695547 27 7.6
01_03_0076 - 12241408-12241545,12241719-12241790,12242173-122422... 27 7.6
>01_03_0111 - 12638078-12639328,12640886-12641146
Length = 503
Score = 208 bits (508), Expect = 2e-54
Identities = 101/178 (56%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYHMAKH 203
+VV+G GPGGYVAAIKAA++G+K +EK TL GTCLNVGCIPSKALLH+SH+YH AK
Sbjct: 42 VVVVGGGPGGYVAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAKS 101
Query: 204 DFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEV 383
F G++ + D MM K AV GLT GI LF+KNKV VKG G + +P++V V
Sbjct: 102 SFAHHGVKFSNLEVDLPAMMAQKDKAVAGLTKGIEGLFKKNKVTYVKGFGKLASPSEVSV 161
Query: 384 H-GEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAG 554
+ G V KNI+IA+GS+V PGVT DEK+I++STGAL L +PKK++VIGAG
Sbjct: 162 DLSDGGSTVVKGKNIIIATGSDVKSLPGVTIDEKKIVSSTGALCLSEIPKKLVVIGAG 219
>05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571
Length = 527
Score = 188 bits (457), Expect = 3e-48
Identities = 105/203 (51%), Positives = 129/203 (63%), Gaps = 26/203 (12%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSK-------------- 161
+VVIG GPGGYVAAIKAA++G+K +EK TL GTCLNVGCIPSK
Sbjct: 41 VVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKEVMNHFDPFYLAVP 100
Query: 162 -----------ALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIA 308
ALLH+SH+YH AK F GI+ + D MM K AV GLT GI
Sbjct: 101 SIYYELRSTMGALLHSSHMYHEAKASFAHHGIKFSNLEIDLPAMMSQKDKAVAGLTKGIE 160
Query: 309 MLFQKNKVNLVKGVGTIVAPNKVEVH-GEKGVETVNTKNILIASGSEVTPFPGVTFDEKQ 485
LF+KNKV VKG G V+P++V V + G TV KNI+IA+GS+V PGVT DEK+
Sbjct: 161 GLFKKNKVEYVKGFGKFVSPSEVSVDLLDGGSTTVKGKNIIIATGSDVKSLPGVTIDEKK 220
Query: 486 IITSTGALSLESVPKKMLVIGAG 554
I++STGAL+L +PKK++VIGAG
Sbjct: 221 IVSSTGALALSEIPKKLVVIGAG 243
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 105 bits (253), Expect = 2e-23
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYH--MA 197
LV+IG+G GG+ AA+ A E G+K +E D + GTC+N GC+PSKALL S
Sbjct: 77 LVIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQD 135
Query: 198 KHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKV 377
+H K G++ +D + + ++ N + + + V+++ G GTIV KV
Sbjct: 136 EHHMKSLGLQVSTAGYDRQAVADHANNLASKIRSNLTNSMKALGVDILTGFGTIVGKQKV 195
Query: 378 EVHGEKGV--ETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGA 551
+G+ G + +NI+IA+GS G+ D K + TS AL LESVP + ++G+
Sbjct: 196 R-YGKVGFPDNEITARNIIIATGSVPFVPNGIEIDGKTVFTSDHALKLESVPDWIAIVGS 254
Query: 552 G 554
G
Sbjct: 255 G 255
>05_01_0413 -
3253345-3253461,3253595-3253666,3253763-3253876,
3254050-3254163,3254420-3254520,3254616-3254694,
3254789-3254863,3254955-3255017,3255281-3255361,
3255449-3255574,3255898-3256022,3256722-3256839,
3257420-3257554,3258029-3258175,3259016-3259321
Length = 590
Score = 103 bits (248), Expect = 7e-23
Identities = 62/181 (34%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYHMA-- 197
LV+IG+G GG+ AA+ A E G+K +E D + GTC+N GC+PSKALL S
Sbjct: 83 LVIIGAGVGGHGAALHAVEEGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELHD 141
Query: 198 KHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKV 377
+H K G++ +D + + ++ N + + + V+++ G G IV KV
Sbjct: 142 EHHMKSLGLQVSSPGYDRQAVADHANNLASKIRSNLTNSMKALGVDILSGFGAIVGKQKV 201
Query: 378 EVHGEKGV--ETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGA 551
+G+ G + + +NI+IA+GS G+ D K + TS AL LESVP + ++G+
Sbjct: 202 R-YGKVGFPDKEITARNIIIATGSVPFVPKGIEVDGKTVFTSDHALKLESVPDWIAIVGS 260
Query: 552 G 554
G
Sbjct: 261 G 261
>02_05_1191 +
34856635-34856775,34856878-34856942,34857096-34857165,
34857499-34857570,34857668-34857871,34858793-34858866,
34858965-34859048,34859582-34859669,34859763-34859844,
34860178-34860251,34860474-34860581,34860683-34860747,
34861317-34861430,34861644-34861743,34861840-34861893,
34861972-34862067
Length = 496
Score = 83.0 bits (196), Expect = 1e-16
Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 12/189 (6%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKV---------VSVEKDPTL*GTCLNVGCIPSKALLHN 176
L VIG+G GG + +A G KV +S + GTC+ GC+P K L++
Sbjct: 25 LFVIGAGSGGVRGSRTSASFGAKVAICELPFHPISSDWQGGHGGTCVIRGCVPKKILVYG 84
Query: 177 SHLYHMAKHDFKQRGIE-TGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVG 353
S + D K G E G++ F++K+++E K + L G + + V +++G G
Sbjct: 85 SS-FRGEFEDAKNFGWEINGDINFNWKRLLENKTQEIVRLNGVYQRILGNSGVTMIEGAG 143
Query: 354 TIVAPNKVEVHGEKG-VETVNTKNILIASGSEVTPFPGVTFDEKQI-ITSTGALSLESVP 527
++V + VEV G + K+ILIA+GS V K++ ITS ALSLE +P
Sbjct: 144 SLVDAHTVEVTKPDGSKQRYTAKHILIATGSRA---QRVNIPGKELAITSDEALSLEELP 200
Query: 528 KKMLVIGAG 554
K+ +++G G
Sbjct: 201 KRAVILGGG 209
>03_01_0439 +
3409422-3409795,3410672-3410897,3411004-3411282,
3411374-3411550,3411653-3411706,3411806-3411954,
3412534-3412597,3412670-3412840,3412922-3413059,
3413180-3413215
Length = 555
Score = 65.7 bits (153), Expect = 2e-11
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Frame = +3
Query: 24 LVVIGSGPGGYVAA--------IKAAEVGMKVVSVEKDPT--L*GTCLNVGCIPSKALLH 173
L IG+G GG A+ +AA M +V D + GTC+ GC+P K L++
Sbjct: 80 LFTIGAGSGGVRASRFASTLYGARAAVCEMPFATVASDDLGGVGGTCVLRGCVPKKLLVY 139
Query: 174 NSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVG 353
S H + + + D+ ++ K ++ L G + + V L++G G
Sbjct: 140 GSKYSHEFEESHGFGWVYETDPKHDWNTLIANKNTELQRLVGIYKNILNNSGVTLIEGRG 199
Query: 354 TIVAPNKVEVHGEKGVETVNTKNILIASGS--EVTPFPGVTFDEKQIITSTGALSLESVP 527
IV P+ V V G + +NILIA G + PG+ + +I S AL L S P
Sbjct: 200 KIVDPHTVSVDG----KLYTARNILIAVGGRPSMPNIPGI----EHVIDSDAALDLPSKP 251
Query: 528 KKMLVIGAG 554
+K+ ++G G
Sbjct: 252 EKIAIVGGG 260
>10_08_0003 -
13992276-13992311,13992461-13992598,13992682-13992852,
13992926-13992989,13993404-13993552,13993700-13993753,
13993894-13994034,13994134-13994412,13994518-13994743,
13995328-13995734
Length = 554
Score = 64.9 bits (151), Expect = 4e-11
Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Frame = +3
Query: 24 LVVIGSGPGGY----VAA----IKAAEVGMKVVSVEKDPT--L*GTCLNVGCIPSKALLH 173
L IG+G GG VAA +AA M +V D + GTC+ GC+P K L++
Sbjct: 91 LFTIGAGSGGMRASRVAASLYGARAAVCEMPFATVASDSLGGVGGTCVLRGCVPKKLLVY 150
Query: 174 NSHLYH--MAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKG 347
S H H F R E D+ +M K ++ L G + + + V +++G
Sbjct: 151 ASKYSHEFEESHGFGWR--YGTEPKHDWSTLMTNKNLELQRLVGVQTNMLKNSGVTIIEG 208
Query: 348 VGTIVAPNKVEVHGEKGVETVNTKNILIASGS--EVTPFPGVTFDEKQIITSTGALSLES 521
G +V P+ V V G + KNILIA G + PG+ + +I S AL L S
Sbjct: 209 RGKVVDPHTVSVDG----KLYTAKNILIAVGGRPSMPDIPGI----EHVIDSDAALDLPS 260
Query: 522 VPKKMLVIGAG 554
P+K+ ++G G
Sbjct: 261 RPEKIAIVGGG 271
>07_03_1550 +
27641099-27641288,27641433-27641646,27641738-27641843,
27642213-27642257,27642275-27642540,27642980-27642991,
27643201-27643480,27643716-27643823,27644276-27644362,
27644448-27644552,27644995-27645125,27645249-27645309
Length = 534
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3
Query: 12 GTRILVVIGSGPGGYVAAIKAAEVGMKVVSVE 107
G LV+IGSGP GY AAI AA +K V E
Sbjct: 68 GVENLVIIGSGPAGYTAAIYAARANLKPVVFE 99
>10_08_0354 -
17104223-17106061,17106770-17106794,17107317-17107561,
17108432-17108677
Length = 784
Score = 34.3 bits (75), Expect = 0.066
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +3
Query: 27 VVIGSGPGGYVAAIKAAEVGMKVVSVEK 110
VV+GSG GG VAA A G KVV VEK
Sbjct: 264 VVVGSGCGGGVAAAVLASAGYKVVVVEK 291
>10_08_0359 - 17167829-17169595,17169976-17169996
Length = 595
Score = 33.9 bits (74), Expect = 0.088
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +3
Query: 27 VVIGSGPGGYVAAIKAAEVGMKVVSVEK 110
V++GSG GG VAA A G KVV VEK
Sbjct: 90 VIVGSGCGGGVAAAVLASAGYKVVVVEK 117
>02_01_0675 - 5028910-5030379
Length = 489
Score = 33.9 bits (74), Expect = 0.088
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL 122
L V+G GP G A + AE G+ V +++ P L
Sbjct: 70 LAVVGGGPAGLAVAQRVAEAGLSVCAIDPSPAL 102
>10_08_0357 - 17158414-17160150,17160534-17160710
Length = 637
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +3
Query: 27 VVIGSGPGGYVAAIKAAEVGMKVVSVEK 110
VV+GSG GG VAA A G KVV VEK
Sbjct: 138 VVVGSGCGGGVAAAVLASKGYKVVVVEK 165
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHN 176
+ V+GSGP G A++ E+G +V +E+ + ++G + + +LH+
Sbjct: 241 VAVVGSGPSGLFASLVLGELGAEVTLIERGQPVEQRGRDIGALVVRRILHS 291
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 27 VVIGSGPGGYVAAIKAAEVGMKVVSVEK 110
+V+GSG GG VAA + A G +V+ +EK
Sbjct: 72 IVVGSGIGGMVAATQLAAKGARVLVLEK 99
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 31.1 bits (67), Expect = 0.62
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEK 110
+ ++GSG GG VAA A G KVV +EK
Sbjct: 284 VAIVGSGCGGGVAAAVLAGAGHKVVVIEK 312
>03_02_0314 + 7398247-7400877
Length = 876
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Frame = -1
Query: 160 FDGIHPTLRQVPHKVGSFSTETTFM------PTSAALIAATYPPGPEP 35
F HP+ R + H + F T+F+ P S AL+ A PP P P
Sbjct: 53 FQPPHPSRRGLRHLLRHFVRSTSFLPFADLDPLSGALLTAPSPPFPAP 100
>05_06_0218 + 26475951-26476252,26476361-26476522,26476769-26476970
Length = 221
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 115 GSFSTETTFMPTSAALIAATYPPGPEP 35
G ST ++ SAAL AAT PP P+P
Sbjct: 36 GGSSTSSSASSFSAALAAATTPPLPDP 62
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 30 VIGSGPGGYVAAIKAAEVGMKVVSV-EKDPTL*GTCLNV 143
++G+GP G AA A++G + V++ EK T+ G C ++
Sbjct: 26 IVGAGPSGLSAAYALAKLGYRNVTLFEKCHTVSGMCESI 64
>04_04_0047 +
22346962-22347437,22347874-22348036,22348143-22348217,
22348302-22348402,22348488-22348603,22348693-22348904,
22349033-22349124,22349319-22349433,22349654-22349757,
22349881-22349926,22350007-22350071,22350192-22350272,
22350356-22350410,22350623-22350711,22350802-22350889,
22351011-22351091
Length = 652
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 QEFGTRILVVI-GSGPGGYVAAIKAAEVGMKVVSVEKD 113
Q G R V++ G G GG V A+ A G +VV +E+D
Sbjct: 65 QAAGRRARVLVAGGGIGGLVFALAAKRKGFEVVVLERD 102
>01_01_0028 +
209283-209563,209659-209890,210015-210160,210694-210724,
211433-211579,212490-212639,212741-212788
Length = 344
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 289 PLTALALYSIIFLKSNVTSPVSIPLCLKSCLAIW*RCELCSKAFDGIHP 143
PL+ + ++++ S T P S C K+C+ + C LC GI P
Sbjct: 69 PLSCMVCHALLHQSSKCT-PCSHKFC-KACILRFKDCPLCGADIQGIEP 115
>02_05_1061 -
33825948-33825995,33826094-33826243,33827154-33827300,
33827381-33827468,33828569-33828714,33828861-33829089,
33829193-33829482
Length = 365
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 289 PLTALALYSIIFLKSNVTSPVSIPLCLKSCLAIW*RCELCSKAFDGIHP 143
PL+ + ++++ S T P S C K+C+ + C LC GI P
Sbjct: 72 PLSCVVCHALLHQSSKCT-PCSHKFC-KACILRFKDCPLCGADIQGIEP 118
>02_05_0502 + 29569563-29570487,29570548-29570621
Length = 332
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 15 TRILVVIGSGPGGYVAAIKAAEVGMKVVSVE 107
TR+ + IGSGP + AAI AA +K V E
Sbjct: 11 TRVCI-IGSGPSAHTAAIYAARAELKPVLFE 40
>02_05_0463 -
29248675-29249391,29250024-29250142,29250276-29250495,
29250621-29250739,29251013-29251093,29251751-29251802,
29252392-29252514
Length = 476
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 306 AMLFQKNKVNLVKGVGTIVAPNKVEVHGEKGVETVNTKNILIASGS 443
A +++N + LV G I A +++ ET++ KN++IA+G+
Sbjct: 79 AKWYKENGIELVLGTKVITADVRMKTLLTATGETISYKNLIIATGA 124
>06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,
4263151-4263315,4263416-4263544,4263758-4263858,
4264527-4264596,4265080-4265331,4265828-4265897,
4266281-4266341,4266916-4267003,4267746-4267830,
4268168-4268234,4268442-4268559,4268843-4268923,
4269022-4269267,4269670-4269771,4269847-4269914,
4270040-4270171,4270283-4270430,4270504-4270790,
4270920-4271067,4271156-4271331,4271407-4271518,
4271614-4271667,4273134-4273244,4273317-4273478,
4273627-4273814,4273948-4274137,4274297-4274464,
4274832-4274912
Length = 1359
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 155 WYTSNIETSTS*SRVLFY*DHLHANLGSFNSCYVSTRA 42
W T ++TST+ SR +FY L A G+ NS + RA
Sbjct: 928 WLTYWVDTSTASSRTIFYLTIL-AAFGALNSFFTLGRA 964
>07_03_1631 -
28258897-28259984,28260518-28260772,28260861-28260975,
28261097-28261149,28261238-28261498,28262122-28262175,
28262294-28262536,28262830-28263073,28263877-28263909
Length = 781
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 54 YVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYH 191
+V A AA VG + + + ++ CL++GC P ++H S H
Sbjct: 342 FVIATLAAVVGSQSI-ISATFSIVKQCLSLGCFPRVKVVHTSRWIH 386
>06_02_0181 - 12694304-12694398,12694512-12695547
Length = 376
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 30 VIGSGPGGYVAAIKAAEVGMKVVSVE 107
+IGSGP + AA+ AA +K V E
Sbjct: 52 IIGSGPAAHTAAVYAARAELKPVLFE 77
>01_03_0076 -
12241408-12241545,12241719-12241790,12242173-12242289,
12243307-12245127,12245361-12245810
Length = 865
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 127 PHKVGSFSTETTFMPTSAALIAATYPPGPE 38
PH + +T T+ +P+SAA PP PE
Sbjct: 110 PHFLNGVATPTSHLPSSAAAPPPPPPPPPE 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,568,719
Number of Sequences: 37544
Number of extensions: 325048
Number of successful extensions: 1024
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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