Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0441
(556 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48030.2 68414.m05351 dihydrolipoamide dehydrogenase 1, mitoc... 215 2e-56
At1g48030.1 68414.m05350 dihydrolipoamide dehydrogenase 1, mitoc... 215 2e-56
At3g17240.3 68416.m02203 dihydrolipoamide dehydrogenase 2, mitoc... 208 2e-54
At3g17240.1 68416.m02202 dihydrolipoamide dehydrogenase 2, mitoc... 208 2e-54
At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1, plast... 106 1e-23
At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2, plast... 103 6e-23
At3g24170.1 68416.m03034 glutathione reductase, putative identic... 90 8e-19
At3g17240.2 68416.m02204 dihydrolipoamide dehydrogenase 2, mitoc... 76 2e-14
At3g54660.1 68416.m06048 gluthatione reductase, chloroplast near... 72 3e-13
At4g28570.1 68417.m04087 alcohol oxidase-related low similarity ... 35 0.032
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 35 0.032
At3g23410.1 68416.m02951 alcohol oxidase-related similar to long... 35 0.042
At1g03990.1 68414.m00385 alcohol oxidase-related low similarity ... 33 0.13
At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical t... 33 0.17
At1g25380.1 68414.m03150 mitochondrial substrate carrier family ... 32 0.22
At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to l... 31 0.39
At4g19380.1 68417.m02853 alcohol oxidase-related similar to long... 31 0.68
At1g63370.1 68414.m07164 flavin-containing monooxygenase family ... 31 0.68
At1g62620.1 68414.m07065 flavin-containing monooxygenase family ... 31 0.68
At4g30720.1 68417.m04354 expressed protein hypothetical protein ... 30 0.90
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At5g61290.1 68418.m07691 flavin-containing monooxygenase family ... 29 1.6
At5g24155.1 68418.m02841 squalene monooxygenase, putative / squa... 29 1.6
At2g40840.1 68415.m05042 glycoside hydrolase family 77 protein c... 29 1.6
At5g07800.1 68418.m00894 flavin-containing monooxygenase family ... 29 2.8
At1g42460.1 68414.m04896 Ulp1 protease family protein contains P... 29 2.8
At5g24160.1 68418.m02842 squalene monooxygenase 1,2 / squalene e... 28 3.6
At5g24150.1 68418.m02839 squalene monooxygenase 1,1 / squalene e... 28 3.6
At1g75340.1 68414.m08751 zinc finger (CCCH-type) family protein ... 28 3.6
At2g33080.1 68415.m04056 leucine-rich repeat family protein cont... 28 4.8
At1g06820.1 68414.m00727 carotenoid isomerase, putative similar ... 28 4.8
At5g67030.2 68418.m08451 zeaxanthin epoxidase (ZEP) (ABA1) ident... 27 6.4
At5g67030.1 68418.m08450 zeaxanthin epoxidase (ZEP) (ABA1) ident... 27 6.4
At4g35460.1 68417.m05040 thioredoxin reductase 1 / NADPH-depende... 27 6.4
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat... 27 6.4
At1g62540.1 68414.m07056 flavin-containing monooxygenase family ... 27 6.4
At5g49555.1 68418.m06133 amine oxidase-related contains Pfam pro... 27 8.4
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 27 8.4
At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearl... 27 8.4
>At1g48030.2 68414.m05351 dihydrolipoamide dehydrogenase 1,
mitochondrial / lipoamide dehydrogenase 1 (MTLPD1)
identical to GB:AAF34795 [gi:12704696] from [Arabidopsis
thaliana]
Length = 507
Score = 215 bits (524), Expect = 2e-56
Identities = 103/178 (57%), Positives = 129/178 (72%), Gaps = 1/178 (0%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYHMAKH 203
+V+IG GPGGYVAAIKA+++G+K +EK L GTCLNVGCIPSKALLH+SH+YH AKH
Sbjct: 46 VVIIGGGPGGYVAAIKASQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKH 105
Query: 204 DFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEV 383
F GI+ V D M+ K NAVK LT GI LF+KNKV VKG G ++PN+V V
Sbjct: 106 SFANHGIKVSSVEVDLPAMLAQKDNAVKNLTRGIEGLFKKNKVTYVKGYGKFISPNEVSV 165
Query: 384 HGEKGVET-VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAG 554
G T V K+I++A+GS+V PG+T DEK+I++STGALSL VPKK++VIGAG
Sbjct: 166 ETIDGGNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLSEVPKKLIVIGAG 223
>At1g48030.1 68414.m05350 dihydrolipoamide dehydrogenase 1,
mitochondrial / lipoamide dehydrogenase 1 (MTLPD1)
identical to GB:AAF34795 [gi:12704696] from [Arabidopsis
thaliana]
Length = 507
Score = 215 bits (524), Expect = 2e-56
Identities = 103/178 (57%), Positives = 129/178 (72%), Gaps = 1/178 (0%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYHMAKH 203
+V+IG GPGGYVAAIKA+++G+K +EK L GTCLNVGCIPSKALLH+SH+YH AKH
Sbjct: 46 VVIIGGGPGGYVAAIKASQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKH 105
Query: 204 DFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEV 383
F GI+ V D M+ K NAVK LT GI LF+KNKV VKG G ++PN+V V
Sbjct: 106 SFANHGIKVSSVEVDLPAMLAQKDNAVKNLTRGIEGLFKKNKVTYVKGYGKFISPNEVSV 165
Query: 384 HGEKGVET-VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAG 554
G T V K+I++A+GS+V PG+T DEK+I++STGALSL VPKK++VIGAG
Sbjct: 166 ETIDGGNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLSEVPKKLIVIGAG 223
>At3g17240.3 68416.m02203 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 507
Score = 208 bits (508), Expect = 2e-54
Identities = 99/178 (55%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYHMAKH 203
+V+IG GPGGYVAAIKAA++G+K +EK L GTCLNVGCIPSKALLH+SH+YH AKH
Sbjct: 46 VVIIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKH 105
Query: 204 DFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEV 383
F G++ V D M+ K AVK LT G+ LF+KNKVN VKG G ++P++V V
Sbjct: 106 VFANHGVKVSSVEVDLPAMLAQKDTAVKNLTRGVEGLFKKNKVNYVKGYGKFLSPSEVSV 165
Query: 384 HGEKGVE-TVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAG 554
G V K+I++A+GS+V PG+T DEK+I++STGALSL +PKK++VIGAG
Sbjct: 166 DTIDGENVVVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLTEIPKKLIVIGAG 223
>At3g17240.1 68416.m02202 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 507
Score = 208 bits (508), Expect = 2e-54
Identities = 99/178 (55%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYHMAKH 203
+V+IG GPGGYVAAIKAA++G+K +EK L GTCLNVGCIPSKALLH+SH+YH AKH
Sbjct: 46 VVIIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKH 105
Query: 204 DFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEV 383
F G++ V D M+ K AVK LT G+ LF+KNKVN VKG G ++P++V V
Sbjct: 106 VFANHGVKVSSVEVDLPAMLAQKDTAVKNLTRGVEGLFKKNKVNYVKGYGKFLSPSEVSV 165
Query: 384 HGEKGVE-TVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAG 554
G V K+I++A+GS+V PG+T DEK+I++STGALSL +PKK++VIGAG
Sbjct: 166 DTIDGENVVVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLTEIPKKLIVIGAG 223
>At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1,
plastidic / lipoamide dehydrogenase 1 (PTLPD1) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159282]
Length = 570
Score = 106 bits (254), Expect = 1e-23
Identities = 60/179 (33%), Positives = 102/179 (56%), Gaps = 2/179 (1%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYH--MA 197
L++IG+G GG+ AA+ A E G+K +E D + GTC+N GC+PSKALL S
Sbjct: 89 LIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQN 147
Query: 198 KHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKV 377
+H K G++ +D + + ++ N + + + V+++ G G+++ P KV
Sbjct: 148 EHHMKSFGLQVSAAGYDRQGVADHANNLATKIRNNLTNSMKAIGVDILTGFGSVLGPQKV 207
Query: 378 EVHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAG 554
+ +G+ + + K+I+IA+GS G+ D K +ITS AL LESVP+ + ++G+G
Sbjct: 208 K-YGKDNI--ITAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLESVPEWIAIVGSG 263
>At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2,
plastidic / lipoamide dehydrogenase 2 (PTLPD2) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159284]
Length = 567
Score = 103 bits (248), Expect = 6e-23
Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 2/179 (1%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHLYH--MA 197
L++IG+G GG+ AA+ A E G+K +E D + GTC+N GC+PSKALL S
Sbjct: 87 LIIIGAGVGGHGAALHAVEKGLKTAIIEGD-VVGGTCVNRGCVPSKALLAVSGRMRELQN 145
Query: 198 KHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKV 377
+H K G++ +D + + ++ +N + + + V+++ G G ++ P KV
Sbjct: 146 EHHMKAFGLQVSAAGYDRQGVADHASNLATKIRNNLTNSMKALGVDILTGFGAVLGPQKV 205
Query: 378 EVHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAG 554
+ G + K+I+IA+GS G+ D K +ITS AL LESVP + ++G+G
Sbjct: 206 KY----GDNIITGKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLESVPDWIAIVGSG 260
>At3g24170.1 68416.m03034 glutathione reductase, putative identical
to GB:P48641 from [Arabidopsis thaliana]
Length = 499
Score = 90.2 bits (214), Expect = 8e-19
Identities = 69/188 (36%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKV---------VSVEKDPTL*GTCLNVGCIPSKALLHN 176
L VIG+G GG AA +A G KV +S E+ + GTC+ GC+P K L++
Sbjct: 28 LFVIGAGSGGVRAARFSANHGAKVGICELPFHPISSEEIGGVGGTCVIRGCVPKKILVYG 87
Query: 177 SHLYHMAKHDFKQRGIETGE-VTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVG 353
+ Y D K G E E V F +KK+++ K + + L L V L +G G
Sbjct: 88 A-TYGGELEDAKNYGWEINEKVDFTWKKLLQKKTDEILRLNNIYKRLLANAAVKLYEGEG 146
Query: 354 TIVAPNKVEVHGEKGVE-TVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPK 530
+V PN+VEV G + + K+ILIA+GS P + E ITS ALSLE PK
Sbjct: 147 RVVGPNEVEVRQIDGTKISYTAKHILIATGSRAQK-PNIPGHE-LAITSDEALSLEEFPK 204
Query: 531 KMLVIGAG 554
+ +V+G G
Sbjct: 205 RAIVLGGG 212
>At3g17240.2 68416.m02204 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 127
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALL 170
+V+IG GPGGYVAAIKAA++G+K +EK L GTCLNVGCIPSK +L
Sbjct: 46 VVIIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKVIL 94
>At3g54660.1 68416.m06048 gluthatione reductase, chloroplast nearly
identical to SP|P42770 Glutathione reductase,
chloroplast precursor (EC 1.8.1.7) (GR) (GRASE)
{Arabidopsis thaliana}; identical to cDNA glutathione
reductase GI:451197
Length = 565
Score = 71.7 bits (168), Expect = 3e-13
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Frame = +3
Query: 24 LVVIGSGPGG---------YVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHN 176
L IG+G GG + A+ E+ +S + + GTC+ GC+P K L++
Sbjct: 90 LFTIGAGSGGVRASRFATSFGASAAVCELPFSTISSDTAGGVGGTCVLRGCVPKKLLVYA 149
Query: 177 SHLYHMAK--HDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGV 350
S H + H F + ET E + D+ ++ K ++ LTG + K V L++G
Sbjct: 150 SKYSHEFEDSHGFGWK-YET-EPSHDWTTLIANKNAELQRLTGIYKNILSKANVKLIEGR 207
Query: 351 GTIVAPNKVEVHGEKGVETVNTKNILIASGSE--VTPFPGVTFDEKQIITSTGALSLESV 524
G ++ P+ V+V G + T+NILIA G + PG F I S AL L S
Sbjct: 208 GKVIDPHTVDVDG----KIYTTRNILIAVGGRPFIPDIPGKEF----AIDSDAALDLPSK 259
Query: 525 PKKMLVIGAG 554
PKK+ ++G G
Sbjct: 260 PKKIAIVGGG 269
>At4g28570.1 68417.m04087 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 748
Score = 35.1 bits (77), Expect = 0.032
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 27 VVIGSGPGGYVAAIKAAEVGMKVVSVEK 110
VV+GSG GG VAA A+ G+KV+ +EK
Sbjct: 241 VVVGSGSGGGVAAANLAKAGLKVLVLEK 268
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 35.1 bits (77), Expect = 0.032
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVE 107
+V+IGSGP GY AAI AA +K V E
Sbjct: 86 VVIIGSGPAGYTAAIYAARANLKPVVFE 113
>At3g23410.1 68416.m02951 alcohol oxidase-related similar to long
chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 746
Score = 34.7 bits (76), Expect = 0.042
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEK 110
+VV+GSG GG VAA A+ G+KVV +EK
Sbjct: 235 VVVVGSGSGGGVAASVLAKSGLKVVVLEK 263
>At1g03990.1 68414.m00385 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]; Location
of EST 248L9T7, gb|AA713296
Length = 758
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 27 VVIGSGPGGYVAAIKAAEVGMKVVSVEK 110
VV+GSG GG VAA A+ G++VV +EK
Sbjct: 249 VVVGSGCGGGVAAAILAKSGLRVVVIEK 276
>At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical to
lycopene beta cyclase GI:1399183|GB:AAB53337
[Arabidopsis thaliana]
Length = 501
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL 122
L ++G GP G A + +E G+ V S++ P L
Sbjct: 85 LAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKL 117
>At1g25380.1 68414.m03150 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 363
Score = 32.3 bits (70), Expect = 0.22
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 222 IETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKVEVHGEK-G 398
IE G TFD++ + E ANA G T G ++++K ++ + G++ G
Sbjct: 2 IEHGNSTFDYRSIREVAANAGAGATAGAIAATFVCPLDVIKTRLQVLGLPEAPASGQRGG 61
Query: 399 VETVNTKNILIASG 440
V + KNI+ G
Sbjct: 62 VIITSLKNIIKEEG 75
>At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to
lycopene epsilon cyclase [GI:1399181]
Length = 524
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 12 GTRILVVIGSGPGGYVAAIKAAEVGMKVVSVEKD 113
G LVVIG GP G A ++A++G+KV + D
Sbjct: 107 GALDLVVIGCGPAGLALAAESAKLGLKVGLIGPD 140
>At4g19380.1 68417.m02853 alcohol oxidase-related similar to long
chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 726
Score = 30.7 bits (66), Expect = 0.68
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 27 VVIGSGPGGYVAAIKAAEVGMKVVSVE 107
VV+GSG GG VAA A+ G KV+ +E
Sbjct: 227 VVVGSGSGGGVAAGVLAKAGYKVLVIE 253
>At1g63370.1 68414.m07164 flavin-containing monooxygenase family
protein / FMO family protein similar to FMO5 from Cavia
porcellus [SP|P49109]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 450
Score = 30.7 bits (66), Expect = 0.68
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKAL 167
+ VIG+GP G VAA + G VV EK + GT + + S L
Sbjct: 13 VAVIGAGPAGLVAARELRREGHSVVVFEKQKQVGGTWIYTDEVESDPL 60
>At1g62620.1 68414.m07065 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 3 (FMO3) from Rattus
norvegicus [GI:12006730], FMO1 from Canis familiaris]
[GI:15420722], FMO1 from Homo sapiens [SP|Q01740];
contains Pfam profile: PF00743 Flavin-binding
monooxygenase-like
Length = 450
Score = 30.7 bits (66), Expect = 0.68
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKAL 167
+ VIG+GP G VAA + G VV EK + GT + + S L
Sbjct: 13 VAVIGAGPAGLVAARELRREGHSVVVFEKQKQVGGTWIYTDEVESDPL 60
>At4g30720.1 68417.m04354 expressed protein hypothetical protein -
Synechocystis sp. (strain PCC 6803),PIR2:S76076
Length = 749
Score = 30.3 bits (65), Expect = 0.90
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALL 170
+ V+G GP G AA+ AE G V +E+ + ++G + + +L
Sbjct: 269 IAVVGGGPSGLFAALVLAEFGADVTLIERGQAVEERGRDIGALVVRKIL 317
>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
family protein similar to C-terminal zinc-finger
[Glycine max] GI:558543; contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 486
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 437 RSD*NIFGINSLNTLLSV-YFNFIWGNYSSYTFDKINLVLLKEHCN 303
RS N G +++ LLS + NF GNY+++ F + + +HCN
Sbjct: 173 RSVRNRAGAATMDPLLSHGHNNFSQGNYAAHPFPPLGSIWYDQHCN 218
>At5g61290.1 68418.m07691 flavin-containing monooxygenase family
protein / FMO family protein low similarity to FMO3 from
Homo sapiens [SP|P31513]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like; supported by
full-length cDNA Ceres:14492
Length = 461
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 15 TRILVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCL 137
++ + VIG+GP G V+A + + G KVV +E++ + G L
Sbjct: 13 SKTVCVIGAGPSGLVSARELKKEGHKVVVMEQNHDVGGQWL 53
>At5g24155.1 68418.m02841 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2)
Length = 121
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKD 113
++++G+G GG A A+ G +V+++E+D
Sbjct: 50 VIIVGAGVGGSALAYSLAKDGRRVLAIERD 79
>At2g40840.1 68415.m05042 glycoside hydrolase family 77 protein
contains Pfam profiles PF02446:
4-alpha-glucanotransferase, PF00686: Starch binding
domain; contains a non-consensus AT-AC intron between at
intron 5
Length = 955
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 368 WGNYSSYTFDKINLVLLKE--HCNTSC 294
WG +S YT DK+ ++ K+ H NT C
Sbjct: 433 WGTFSDYTDDKLEKLISKDNLHYNTIC 459
>At5g07800.1 68418.m00894 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 2 (FMO2) from Homo
sapiens [GI:1834493]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 460
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 30 VIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*G 128
VIG+GP G V+A + + G KVV +E++ + G
Sbjct: 18 VIGAGPAGLVSARELRKEGHKVVVLEQNEDVGG 50
>At1g42460.1 68414.m04896 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 762
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -1
Query: 547 PITNIFFGTDSK---ESAPVDVIICFSSKVTPGKGVT--SDPEAIRIFLVLTVSTPFSPC 383
P + FG + E A +D II S + P + +T +D + +R+ ++ ++ P
Sbjct: 121 PYYSTLFGLEEDVTVERAHLDPIIFPDSWMNPAEDLTWLNDKDDVRVENIVKIAEEGKPF 180
Query: 382 TSTLFGATIVPT 347
++ +FG +PT
Sbjct: 181 SNEMFGGGCIPT 192
>At5g24160.1 68418.m02842 squalene monooxygenase 1,2 / squalene
epoxidase 1,2 (SQP1,2) identical to SP|O65402
Length = 517
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 3 QEFGTRILVVIGSGPGGYVAAIKAAEVGMKVVSVEKD 113
Q+ G ++++G+G GG A A+ G +V +E+D
Sbjct: 41 QKDGAADVIIVGAGVGGSALAYALAKDGRRVHVIERD 77
>At5g24150.1 68418.m02839 squalene monooxygenase 1,1 / squalene
epoxidase 1,1 (SQP1,1) identical to SP|O65404
Length = 516
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 3 QEFGTRILVVIGSGPGGYVAAIKAAEVGMKVVSVEKD 113
+E G ++++G+G GG A A+ G +V +E+D
Sbjct: 41 REDGATDVIIVGAGVGGSALAYALAKDGRRVHVIERD 77
>At1g75340.1 68414.m08751 zinc finger (CCCH-type) family protein
weak similarity to Nucleoporin NUP42 (Nuclear pore
protein NUP42) (Swiss-Prot:P49686) [Saccharomyces
cerevisiae]; contains Pfam profile PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 435
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 127 PHKVGSFSTETTFMPTSAALIAATYPPGP 41
P+ SF+ +TTF T+A ++++ PP P
Sbjct: 245 PNAFASFNQQTTFPNTNAGGVSSSGPPNP 273
>At2g33080.1 68415.m04056 leucine-rich repeat family protein
contains leucine rich-repeat domain Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 740
Score = 27.9 bits (59), Expect = 4.8
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = -3
Query: 389 SVYFNFIWGNYSSYTFDKINLVLLKEHCNTSCEAFNSISFIFHHLFEVKCNFTSFNTPLL 210
S + N +W + S+ K+ L C + NS F FH L + + +F +
Sbjct: 62 SDHSNGVWCDNSTGVVTKLQL----NACLSGTLNPNSSLFWFHQLRFLNLSHNNFTSTSF 117
Query: 209 EVMFGHMVKM*VVQ*SF*WYTSNIETSTS 123
FG++ K+ V+ SF +T + +S S
Sbjct: 118 PSEFGNLNKVEVLDLSFNSFTGQVPSSFS 146
>At1g06820.1 68414.m00727 carotenoid isomerase, putative similar to
carotenoid isomerase from Lycopersicon esculentum
[gi:19550437]; contains Pfam profile: PF02032 Phytoene
dehydrogenase related enzyme
Length = 595
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 27 VVIGSGPGGYVAAIKAAEVGMKVVSVEK 110
+VIGSG GG VAA + A +V+ +EK
Sbjct: 81 IVIGSGIGGLVAATQLAVKEARVLVLEK 108
>At5g67030.2 68418.m08451 zeaxanthin epoxidase (ZEP) (ABA1)
identical to GI:9857296 AtABA1; controls Pfam profiles
PF01360: Monooxygenase and PF00498: FHA domain;
identical to cDNA AtABA1, GI:9857295
Length = 610
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 15 TRILVVIGSGPGGYVAAIKAAEVGMKVVSVEKD 113
+R+LV G G GG V A+ A + G V+ EKD
Sbjct: 81 SRVLVA-GGGIGGLVFALAAKKKGFDVLVFEKD 112
>At5g67030.1 68418.m08450 zeaxanthin epoxidase (ZEP) (ABA1)
identical to GI:9857296 AtABA1; controls Pfam profiles
PF01360: Monooxygenase and PF00498: FHA domain;
identical to cDNA AtABA1, GI:9857295
Length = 667
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 15 TRILVVIGSGPGGYVAAIKAAEVGMKVVSVEKD 113
+R+LV G G GG V A+ A + G V+ EKD
Sbjct: 81 SRVLVA-GGGIGGLVFALAAKKKGFDVLVFEKD 112
>At4g35460.1 68417.m05040 thioredoxin reductase 1 / NADPH-dependent
thioredoxin reductase 1 (NTR1) identical to SP|Q39243
Length = 375
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVE 107
L ++GSGP + AAI AA +K + E
Sbjct: 53 LCIVGSGPAAHTAAIYAARAELKPLLFE 80
>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase, PF01593: amine oxidase, flavin-containing
Length = 867
Score = 27.5 bits (58), Expect = 6.4
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMK-VVSVEKDPTL*GTCLNVGC----IPSKALLHNSHLY 188
+ VIGSG G +A A G+K VV EK+ +L G V + ++ N Y
Sbjct: 3 VAVIGSGISGLGSAYVLANQGVKEVVLYEKEESLGGHAKTVRFDGVDLDLGFMVFNRVTY 62
Query: 189 HMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNK 329
F+ G+E F ++ G G++ LF + K
Sbjct: 63 PNMMEFFENLGVEMEVSDMSFAVSLDNGKGCEWGSRNGVSGLFAQKK 109
>At1g62540.1 68414.m07056 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase GB:AAA21178 GI:349534
from Oryctolagus cuniculus [SP|P32417], SP|P97501 from
Mus musculus; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 457
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 24 LVVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*G 128
+VVIG+G G VAA + + G VV +E++ + G
Sbjct: 13 VVVIGAGAAGLVAARELSREGHTVVVLEREKEVGG 47
>At5g49555.1 68418.m06133 amine oxidase-related contains Pfam
profile PF01593: amine oxidase, flavin-containing
Length = 556
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 27 VVIGSGPGGYVAAIKAAEVGMKVVSVEKDPTL*GTCLNVGCIPSKALLHNSHL 185
VVIG G G AA A G+ V +E+ + G + +P S+L
Sbjct: 17 VVIGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAAVTEEIVPGFKFSRCSYL 69
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 276 NAVKGLTGGIAMLFQKNKVNLVKGVGTIVAPNKV 377
N +KGL ++ K+ ++KGV IV P ++
Sbjct: 136 NTIKGLLSEFICSKKETKIGILKGVSGIVRPGRM 169
>At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearly
identical to acyl-activating enzyme 18 [Arabidopsis
thaliana] GI:29893268; similar to acetyl-CoA synthetase
[SP|P27095] from Methanothrix soehngenii; contains Pfam
AMP-binding enzyme domain PF00501l; identical to cDNA
acyl-activating enzyme 18 (At1g55320) GI: 29893267
Length = 725
Score = 27.1 bits (57), Expect = 8.4
Identities = 23/87 (26%), Positives = 36/87 (41%)
Frame = -1
Query: 541 TNIFFGTDSKESAPVDVIICFSSKVTPGKGVTSDPEAIRIFLVLTVSTPFSPCTSTLFGA 362
T I F + E++ VD ++ SSK K V + + +P P FGA
Sbjct: 467 TKIKFFATTGEASNVDDVLWLSSKADY-KPVIECCGGTELASSYIIGSPLQP---QAFGA 522
Query: 361 TIVPTPLTRLTLFF*KSIAIPPVRPLT 281
P+ TR+ +F + P +P T
Sbjct: 523 FSTPSMTTRIIIFDENGVPYPDDQPCT 549
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,633,871
Number of Sequences: 28952
Number of extensions: 266887
Number of successful extensions: 917
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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