Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0440
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.9  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 366 SGHAEAAPRFPHQLRSDTP 422
           SG A   P  PH+  + TP
Sbjct: 2   SGEAHIGPPTPHESNTSTP 20


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 175 KHLNSAREVPREYLYYTI 122
           K  ++  EVPR Y+ YTI
Sbjct: 29  KITSTNNEVPRWYICYTI 46


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 187 MSDEIAENGTANGDVPEIELIIKASTIDGR 276
           +  EI   G + GD  E +LI+   T+D R
Sbjct: 9   VESEITSGGKSKGDPTERDLIV---TLDDR 35


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 315 HEVFLTEQTGALSSSIDRRC 256
           H     E++G+ SSSI  RC
Sbjct: 798 HHYGRRERSGSESSSISERC 817


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,438
Number of Sequences: 336
Number of extensions: 3342
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)