Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0440
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058721-1|AAL13950.1|  260|Drosophila melanogaster LD46306p pro...   251   5e-67
AE014298-1969|AAF48326.1|  260|Drosophila melanogaster CG10997-P...   251   5e-67
AY572491-1|AAS89329.1|  659|Drosophila melanogaster monkey-king ...    32   0.68 
AY562976-1|AAS72416.1|  659|Drosophila melanogaster monkey king ...    32   0.68 
AY071648-1|AAL49270.1|  215|Drosophila melanogaster RE70889p pro...    32   0.68 
AY060662-1|AAL28210.1|  460|Drosophila melanogaster GH08776p pro...    32   0.68 
AY058296-1|AAL13525.1|  659|Drosophila melanogaster GH05885p pro...    32   0.68 
AE014297-1491|AAF54789.1|  215|Drosophila melanogaster CG11512-P...    32   0.68 
AE014296-1446|AAN12006.1|  659|Drosophila melanogaster CG7163-PB...    32   0.68 
AE014296-1445|AAN12005.1|  659|Drosophila melanogaster CG7163-PA...    32   0.68 
BT011354-1|AAR96146.1|  492|Drosophila melanogaster RE71830p pro...    30   2.1  
BT001719-1|AAN71474.1|  655|Drosophila melanogaster RE68846p pro...    30   2.1  
AE013599-482|AAF59206.3|  655|Drosophila melanogaster CG1399-PA,...    30   2.1  
AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,...    30   2.1  
AE014297-1492|AAF54790.3|  216|Drosophila melanogaster CG12242-P...    29   3.6  
BT029641-1|ABL75700.1|  146|Drosophila melanogaster IP17184p pro...    29   6.3  
BT029614-1|ABL75673.1|  146|Drosophila melanogaster IP17084p pro...    29   6.3  
BT023794-1|AAZ41803.1|  409|Drosophila melanogaster GH05001p pro...    29   6.3  
BT023541-1|AAY84941.1|  300|Drosophila melanogaster IP09848p pro...    29   6.3  
BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p pro...    29   6.3  
AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p pro...    29   6.3  
AE014298-2746|AAF48865.1|  832|Drosophila melanogaster CG6606-PA...    29   6.3  
AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-P...    29   6.3  
AE014296-2144|AAF49916.1|  733|Drosophila melanogaster CG10663-P...    29   6.3  
AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-P...    29   6.3  
BT023525-1|AAY84925.1|  298|Drosophila melanogaster IP09948p pro...    28   8.4  
AY240021-1|AAP57522.1|  595|Drosophila melanogaster SLC26 membra...    28   8.4  
AY051897-1|AAK93321.1|  595|Drosophila melanogaster LD38576p pro...    28   8.4  
AE014298-1132|AAF46331.1|  301|Drosophila melanogaster CG17982-P...    28   8.4  
AE013599-2553|AAF57797.1|  595|Drosophila melanogaster CG5002-PA...    28   8.4  

>AY058721-1|AAL13950.1|  260|Drosophila melanogaster LD46306p
           protein.
          Length = 260

 Score =  251 bits (615), Expect = 5e-67
 Identities = 118/129 (91%), Positives = 126/129 (97%)
 Frame = +1

Query: 208 NGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPP 387
           NG++  DVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPP
Sbjct: 13  NGSSKFDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPP 72

Query: 388 PDFRTNFEATHPPILIDNGLAILENEKIERHIMKSVPGGHNLFVQDKEVASLIENLYSKL 567
           PDFRTNFEATHPPILIDNGLAILENEKIERHIMK++PGG+NLFVQDKEVA+LIENLY KL
Sbjct: 73  PDFRTNFEATHPPILIDNGLAILENEKIERHIMKNIPGGYNLFVQDKEVATLIENLYVKL 132

Query: 568 KLVLVRKDE 594
           KL+LV+KDE
Sbjct: 133 KLMLVKKDE 141


>AE014298-1969|AAF48326.1|  260|Drosophila melanogaster CG10997-PA
           protein.
          Length = 260

 Score =  251 bits (615), Expect = 5e-67
 Identities = 118/129 (91%), Positives = 126/129 (97%)
 Frame = +1

Query: 208 NGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPP 387
           NG++  DVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPP
Sbjct: 13  NGSSKFDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPP 72

Query: 388 PDFRTNFEATHPPILIDNGLAILENEKIERHIMKSVPGGHNLFVQDKEVASLIENLYSKL 567
           PDFRTNFEATHPPILIDNGLAILENEKIERHIMK++PGG+NLFVQDKEVA+LIENLY KL
Sbjct: 73  PDFRTNFEATHPPILIDNGLAILENEKIERHIMKNIPGGYNLFVQDKEVATLIENLYVKL 132

Query: 568 KLVLVRKDE 594
           KL+LV+KDE
Sbjct: 133 KLMLVKKDE 141


>AY572491-1|AAS89329.1|  659|Drosophila melanogaster monkey-king
           protein.
          Length = 659

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 589 LCEPAPASVLNTGSRLETRPPCPARIGCVHLART---S*CAVRFSRSQVSP 446
           LC P   S +N    L+  PP PAR+  + L +      C V F +S +SP
Sbjct: 272 LCPPVILSGVNYAYSLDLTPPIPARLTTLDLLKNFFIYYCTVNFDKSVLSP 322


>AY562976-1|AAS72416.1|  659|Drosophila melanogaster monkey king
           protein protein.
          Length = 659

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 589 LCEPAPASVLNTGSRLETRPPCPARIGCVHLART---S*CAVRFSRSQVSP 446
           LC P   S +N    L+  PP PAR+  + L +      C V F +S +SP
Sbjct: 272 LCPPVILSGVNYAYSLDLTPPIPARLTTLDLLKNFFIYYCTVNFDKSVLSP 322


>AY071648-1|AAL49270.1|  215|Drosophila melanogaster RE70889p
           protein.
          Length = 215

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +1

Query: 334 ELKTISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLAILENEKIERHIMKSVPGGHNL 513
           EL    L++T  +  KP    + N + T P  L+DNG AI E+  I  ++++      +L
Sbjct: 25  ELNKKQLRITEGEHLKPE-FLKLNPQHTIPT-LVDNGFAIWESRAIAVYLVEKYGKDDSL 82

Query: 514 FVQDKEVASLI-ENLY 558
           F  D +  +LI + LY
Sbjct: 83  FPNDPQKRALINQRLY 98


>AY060662-1|AAL28210.1|  460|Drosophila melanogaster GH08776p
           protein.
          Length = 460

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 589 LCEPAPASVLNTGSRLETRPPCPARIGCVHLART---S*CAVRFSRSQVSP 446
           LC P   S +N    L+  PP PAR+  + L +      C V F +S +SP
Sbjct: 73  LCPPVILSGVNYAYSLDLTPPIPARLTTLDLLKNFFIYYCTVNFDKSVLSP 123


>AY058296-1|AAL13525.1|  659|Drosophila melanogaster GH05885p
           protein.
          Length = 659

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 589 LCEPAPASVLNTGSRLETRPPCPARIGCVHLART---S*CAVRFSRSQVSP 446
           LC P   S +N    L+  PP PAR+  + L +      C V F +S +SP
Sbjct: 272 LCPPVILSGVNYAYSLDLTPPIPARLTTLDLLKNFFIYYCTVNFDKSVLSP 322


>AE014297-1491|AAF54789.1|  215|Drosophila melanogaster CG11512-PA
           protein.
          Length = 215

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +1

Query: 334 ELKTISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLAILENEKIERHIMKSVPGGHNL 513
           EL    L++T  +  KP    + N + T P  L+DNG AI E+  I  ++++      +L
Sbjct: 25  ELNKKQLRITEGEHLKPE-FLKLNPQHTIPT-LVDNGFAIWESRAIAVYLVEKYGKDDSL 82

Query: 514 FVQDKEVASLI-ENLY 558
           F  D +  +LI + LY
Sbjct: 83  FPNDPQKRALINQRLY 98


>AE014296-1446|AAN12006.1|  659|Drosophila melanogaster CG7163-PB,
           isoform B protein.
          Length = 659

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 589 LCEPAPASVLNTGSRLETRPPCPARIGCVHLART---S*CAVRFSRSQVSP 446
           LC P   S +N    L+  PP PAR+  + L +      C V F +S +SP
Sbjct: 272 LCPPVILSGVNYAYSLDLTPPIPARLTTLDLLKNFFIYYCTVNFDKSVLSP 322


>AE014296-1445|AAN12005.1|  659|Drosophila melanogaster CG7163-PA,
           isoform A protein.
          Length = 659

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 589 LCEPAPASVLNTGSRLETRPPCPARIGCVHLART---S*CAVRFSRSQVSP 446
           LC P   S +N    L+  PP PAR+  + L +      C V F +S +SP
Sbjct: 272 LCPPVILSGVNYAYSLDLTPPIPARLTTLDLLKNFFIYYCTVNFDKSVLSP 322


>BT011354-1|AAR96146.1|  492|Drosophila melanogaster RE71830p
           protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 137 PLLHNITQATRFQNTDKLPYFRLVISRRSNLAKSR*VSNP 18
           PLL + + ATR ++TD L  +  ++ R+S L K R    P
Sbjct: 131 PLLKSASWATRSRSTDNLEKYSPLVGRKSPLVKMRTEGGP 170


>BT001719-1|AAN71474.1|  655|Drosophila melanogaster RE68846p
           protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 137 PLLHNITQATRFQNTDKLPYFRLVISRRSNLAKSR*VSNP 18
           PLL + + ATR ++TD L  +  ++ R+S L K R    P
Sbjct: 323 PLLKSASWATRSRSTDNLEKYSPLVGRKSPLVKMRTEGGP 362


>AE013599-482|AAF59206.3|  655|Drosophila melanogaster CG1399-PA,
           isoform A protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 137 PLLHNITQATRFQNTDKLPYFRLVISRRSNLAKSR*VSNP 18
           PLL + + ATR ++TD L  +  ++ R+S L K R    P
Sbjct: 323 PLLKSASWATRSRSTDNLEKYSPLVGRKSPLVKMRTEGGP 362


>AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,
            isoform B protein.
          Length = 1399

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 137  PLLHNITQATRFQNTDKLPYFRLVISRRSNLAKSR*VSNP 18
            PLL + + ATR ++TD L  +  ++ R+S L K R    P
Sbjct: 1067 PLLKSASWATRSRSTDNLEKYSPLVGRKSPLVKMRTEGGP 1106


>AE014297-1492|AAF54790.3|  216|Drosophila melanogaster CG12242-PA
           protein.
          Length = 216

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +1

Query: 358 VTTVDMQKPPPDFRTNFEATHP-PILIDNGLAILENEKIERHIMKSVPGGHNLFVQDKEV 534
           + T++  +  P+F       H  P L+DNG +I E+  I  ++++       LF +D + 
Sbjct: 31  LNTLEKDQLKPEF-VKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKDDTLFPKDPKK 89

Query: 535 ASLI-ENLY 558
            +L+ + LY
Sbjct: 90  QALVNQRLY 98


>BT029641-1|ABL75700.1|  146|Drosophila melanogaster IP17184p
           protein.
          Length = 146

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 141 SRGTSLAEFKCFLNHDVG*NRRKWYS*WRRSGDRAYNKGIDDR 269
           ++G  +A F CFLN +V    R  ++ WR S +   N  I +R
Sbjct: 72  TQGFFVALFYCFLNSEVRQTLRHGFTRWRESRNIHRNSSIKNR 114


>BT029614-1|ABL75673.1|  146|Drosophila melanogaster IP17084p
           protein.
          Length = 146

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 141 SRGTSLAEFKCFLNHDVG*NRRKWYS*WRRSGDRAYNKGIDDR 269
           ++G  +A F CFLN +V    R  ++ WR S +   N  I +R
Sbjct: 72  TQGFFVALFYCFLNSEVRQTLRHGFTRWRESRNIHRNSSIKNR 114


>BT023794-1|AAZ41803.1|  409|Drosophila melanogaster GH05001p
           protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 349 SLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLA 450
           SL +  + +Q PPP    NF   HP  L++NG++
Sbjct: 263 SLNIQRIGLQ-PPPVGTPNFTPRHPSPLLNNGVS 295


>BT023541-1|AAY84941.1|  300|Drosophila melanogaster IP09848p
           protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -3

Query: 290 QAPFRLPSIVDAFIISSISGTSPLAVPFS 204
           QA F L    D   +SSISGTSP A+P S
Sbjct: 14  QAEFGLQPTSDLSKLSSISGTSPEAMPKS 42


>BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 141 SRGTSLAEFKCFLNHDVG*NRRKWYS*WRRSGDRAYNKGIDDR 269
           ++G  +A F CFLN +V    R  ++ WR S +   N  I +R
Sbjct: 402 TQGFFVALFYCFLNSEVRQTLRHGFTRWRESRNIHRNSSIKNR 444


>AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p
           protein.
          Length = 872

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
 Frame = +3

Query: 354 KGDNSGHAEAAPRFPHQLRSDTPAHTDRQWAGDT*ERENRTAHHEVRARWTQPIRAGQGG 533
           +GD SG A A   FP  + +   A   +  +     RE R+   +  +R T    +  GG
Sbjct: 350 RGDRSGRAYANNNFPENVHASPGAQRSKSLSHRNESREGRSGKPQA-SRATTNYHSNSGG 408

Query: 534 -RVSNREPVFKTEAGAGSQR 590
            R  +     K+ A AG  R
Sbjct: 409 DRNVDHRSAPKSMASAGEVR 428


>AE014298-2746|AAF48865.1|  832|Drosophila melanogaster CG6606-PA
           protein.
          Length = 832

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 349 SLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLA 450
           SL +  + +Q PPP    NF   HP  L++NG++
Sbjct: 263 SLNIQRIGLQ-PPPVGTPNFTPRHPSPLLNNGVS 295


>AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-PA,
           isoform A protein.
          Length = 872

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
 Frame = +3

Query: 354 KGDNSGHAEAAPRFPHQLRSDTPAHTDRQWAGDT*ERENRTAHHEVRARWTQPIRAGQGG 533
           +GD SG A A   FP  + +   A   +  +     RE R+   +  +R T    +  GG
Sbjct: 350 RGDRSGRAYANNNFPENVHASPGAQRSKSLSHRNESREGRSGKPQA-SRATTNYHSNSGG 408

Query: 534 -RVSNREPVFKTEAGAGSQR 590
            R  +     K+ A AG  R
Sbjct: 409 DRNVDHRSAPKSMASAGEVR 428


>AE014296-2144|AAF49916.1|  733|Drosophila melanogaster CG10663-PA
           protein.
          Length = 733

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 379 KPPPDFRTNFEATHPPI 429
           KPPP++ + + +THPPI
Sbjct: 153 KPPPNYASLYPSTHPPI 169


>AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-PA
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 141 SRGTSLAEFKCFLNHDVG*NRRKWYS*WRRSGDRAYNKGIDDR 269
           ++G  +A F CFLN +V    R  ++ WR S +   N  I +R
Sbjct: 402 TQGFFVALFYCFLNSEVRQTLRHGFTRWRESRNIHRNSSIKNR 444


>BT023525-1|AAY84925.1|  298|Drosophila melanogaster IP09948p
           protein.
          Length = 298

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -3

Query: 290 QAPFRLPSIVDAFIISSISGTSPLAVP 210
           QA F L    D   +SSISGTSP A+P
Sbjct: 11  QAEFGLQPTSDLSKLSSISGTSPEAMP 37


>AY240021-1|AAP57522.1|  595|Drosophila melanogaster SLC26 membrane
           transporter protein protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = -3

Query: 410 SKLVRKSGGGFCMSTVVTFKLIVLSSANRYRSMKYS*QNRQAPFR--LPSIVDAFIISSI 237
           S L+R  G   C  + VT K  +L    RYR ++Y  Q+  A F   L +I  A     +
Sbjct: 17  STLIRDGGRKLCRPSTVTNKFPILKWLPRYR-LEYIMQDFIAGFTVGLTTIPQAIAYGVV 75

Query: 236 SGTSPLAVPFSA 201
           +G  P    +SA
Sbjct: 76  AGLEPQYGLYSA 87


>AY051897-1|AAK93321.1|  595|Drosophila melanogaster LD38576p
           protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = -3

Query: 410 SKLVRKSGGGFCMSTVVTFKLIVLSSANRYRSMKYS*QNRQAPFR--LPSIVDAFIISSI 237
           S L+R  G   C  + VT K  +L    RYR ++Y  Q+  A F   L +I  A     +
Sbjct: 17  STLIRDGGRKLCRPSTVTNKFPILKWLPRYR-LEYIMQDFIAGFTVGLTTIPQAIAYGVV 75

Query: 236 SGTSPLAVPFSA 201
           +G  P    +SA
Sbjct: 76  AGLEPQYGLYSA 87


>AE014298-1132|AAF46331.1|  301|Drosophila melanogaster CG17982-PA
           protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -3

Query: 290 QAPFRLPSIVDAFIISSISGTSPLAVP 210
           QA F L    D   +SSISGTSP A+P
Sbjct: 14  QAEFGLQPTSDLSKLSSISGTSPEAMP 40


>AE013599-2553|AAF57797.1|  595|Drosophila melanogaster CG5002-PA
           protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = -3

Query: 410 SKLVRKSGGGFCMSTVVTFKLIVLSSANRYRSMKYS*QNRQAPFR--LPSIVDAFIISSI 237
           S L+R  G   C  + VT K  +L    RYR ++Y  Q+  A F   L +I  A     +
Sbjct: 17  STLIRDGGRKLCRPSTVTNKFPILKWLPRYR-LEYIMQDFIAGFTVGLTTIPQAIAYGVV 75

Query: 236 SGTSPLAVPFSA 201
           +G  P    +SA
Sbjct: 76  AGLEPQYGLYSA 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,297,996
Number of Sequences: 53049
Number of extensions: 652659
Number of successful extensions: 1610
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)