Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0440
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.      81   8e-16
AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical...    81   8e-16
Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70783-7|CAA94858.1|  239|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical...    28   4.4  
Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AY308063-1|AAQ75554.1|  290|Caenorhabditis elegans EXC-4 protein.
          Length = 290

 Score = 80.6 bits (190), Expect = 8e-16
 Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
 Frame = +1

Query: 196 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 375
           +I  NG      P +EL +KAS ID RR GA LFCQE++M+LY L E+    ++V TV++
Sbjct: 6   QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64

Query: 376 QKPPPDFRTNFEATHPPILI--DNGLAILENEKIERHIMKSVPGGH-NLFVQDKEVASLI 546
                 F+ NF    PPI+I  +  L   +N +IE  I       +  LF +D      I
Sbjct: 65  NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122

Query: 547 ENLYSKLKLVLVRKDE 594
           ENLY   KL L  K E
Sbjct: 123 ENLYRNFKLFLRAKVE 138


>AL132876-18|CAD21669.2|  290|Caenorhabditis elegans Hypothetical
           protein Y105E8A.22 protein.
          Length = 290

 Score = 80.6 bits (190), Expect = 8e-16
 Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
 Frame = +1

Query: 196 EIAENGTANGDVPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDM 375
           +I  NG      P +EL +KAS ID RR GA LFCQE++M+LY L E+    ++V TV++
Sbjct: 6   QIQSNGDPQSK-PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNV 64

Query: 376 QKPPPDFRTNFEATHPPILI--DNGLAILENEKIERHIMKSVPGGH-NLFVQDKEVASLI 546
                 F+ NF    PPI+I  +  L   +N +IE  I       +  LF +D      I
Sbjct: 65  NSEA--FKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 122

Query: 547 ENLYSKLKLVLVRKDE 594
           ENLY   KL L  K E
Sbjct: 123 ENLYRNFKLFLRAKVE 138


>Z81561-1|CAB04552.2|  550|Caenorhabditis elegans Hypothetical
           protein K03D10.3 protein.
          Length = 550

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +1

Query: 301 QEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTN 405
           + Y ++ +++  +K +   +  +D +KPP + RTN
Sbjct: 38  KRYMVEKFIINTVKKVVAVIIHIDFRKPPQEVRTN 72


>Z70783-7|CAA94858.1|  239|Caenorhabditis elegans Hypothetical
           protein ZK856.10 protein.
          Length = 239

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 232 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAE 336
           P ++ +I+A  I   R+G CL  Q +F D+++ AE
Sbjct: 79  PFVDEVIEAKVIGSSRQGLCLTIQ-FFEDIFVPAE 112


>AF099925-13|AAC69503.2|  287|Caenorhabditis elegans Hypothetical
           protein K01A2.1 protein.
          Length = 287

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 385 PPDFRTNFEATHPPILIDNGLAILENEKIERHIMKS 492
           P D RT F A HP + ID  +  L  E+I  + ++S
Sbjct: 147 PKDGRTLFSARHPTVTIDKRIKKLAAERIITNKIRS 182


>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 430 LIDNGLAILENEKIERHIMKSVPGGHNLFVQDKEVA 537
           +IDN  A L+ +K + H+ K V    N   Q  EVA
Sbjct: 349 VIDNSFANLDEKKCQPHVAKCVHDALNAAYQRHEVA 384


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,825,775
Number of Sequences: 27780
Number of extensions: 327195
Number of successful extensions: 808
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)