Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0439
(616 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 57 2e-09
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 38 0.001
SPAC3G9.06 |frs2||phenylalanine-tRNA ligase alpha subunit Frs2 |... 30 0.31
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 29 0.53
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 28 0.93
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 27 1.6
SPAC328.10c |rps502|rps5-2|40S ribosomal protein S5|Schizosaccha... 27 1.6
SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces p... 27 1.6
SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces ... 27 2.2
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.2
SPAC3A11.04 |||siepin homolog|Schizosaccharomyces pombe|chr 1|||... 27 2.2
SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyce... 27 2.8
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.8
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 26 3.8
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 26 5.0
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 26 5.0
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 5.0
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 6.6
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 25 6.6
SPBC1683.06c |||uridine ribohydrolase |Schizosaccharomyces pombe... 25 6.6
SPAC16E8.10c |||mitochondrial ribosomal protein subunit S7|Schiz... 25 8.7
SPAC7D4.05 |||hydrolase |Schizosaccharomyces pombe|chr 1|||Manual 25 8.7
SPCC191.03c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 8.7
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 57.2 bits (132), Expect = 2e-09
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +2
Query: 113 PKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSR 292
P+E +W +RKE LDRQV ++ +K + LK+ A ++D ILAKEI R+
Sbjct: 13 PQEQNRKWQSIIRKEQRQLDRQVYHLKAGRKKAEVQLKQLAKQSDITNMRILAKEIARAN 72
Query: 293 KAINKIYTSKAHLNSVQLQMKNQL 364
+ ++ SKA L S+ LQ+ +Q+
Sbjct: 73 RHGKRLAESKALLGSLSLQLNDQM 96
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 37.9 bits (84), Expect = 0.001
Identities = 20/90 (22%), Positives = 45/90 (50%)
Frame = +2
Query: 86 LFGKSPERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTI 265
LFG ++P+E + L + LDR+ + + E + + +K +A + I
Sbjct: 7 LFGGG--KSPQEQLRAHQRSLGRAERELDRERTKLDQRERALIQEIKGSAKAGNTGAARI 64
Query: 266 LAKEIIRSRKAINKIYTSKAHLNSVQLQMK 355
A++++R R + K+ +K L ++ L+++
Sbjct: 65 QARDLMRLRNSRKKMMNAKTQLQAISLRLQ 94
>SPAC3G9.06 |frs2||phenylalanine-tRNA ligase alpha subunit Frs2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 499
Score = 29.9 bits (64), Expect = 0.31
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 146 LRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSKA 325
++K+G L + +I E K+ +KE T +D + T L K + R I K
Sbjct: 118 IKKDGDKLVKNTDSITDETPKVLSEIKEHGTISDSKTLTDLKKRKLVERNKIMYFSLRKG 177
Query: 326 HLNSVQLQMKN 358
S+Q++ N
Sbjct: 178 PNFSLQIEKLN 188
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 29.1 bits (62), Expect = 0.53
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 95 KSPERNPKEMVNEWSHKLRKEGYNLD-RQVRAIQREEEKIKRS 220
K+ ERNP E +E +HK K G L+ R+ I + KI ++
Sbjct: 55 KALERNPDEFYHEMTHKKTKNGVPLEQREDSTIDMDTIKILKT 97
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 28.3 bits (60), Expect = 0.93
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 264 IVHTCLSFLVAASFSDRLIFSSSLWIALTCLSKLY 160
I+ T S+++ + D L +S LW A+ CL+ ++
Sbjct: 1633 ILRTFNSYVLVMNSDDLLSYSQILWTAIACLTTIH 1667
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 GKSP-ERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTIL 268
G +P +N + W ++ + GY L Q +A Q E +++ EAA ++ +
Sbjct: 755 GDTPLNKNLNDYYPSWDQRV-EAGYKLAAQQKAEQEAREAAEKAASEAAERSSSEAAASS 813
Query: 269 AKEII 283
+ E +
Sbjct: 814 SSESV 818
>SPAC328.10c |rps502|rps5-2|40S ribosomal protein
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 203
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 179 VRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSK 322
+R + + I +EAA +N K + LA+EII + K + Y K
Sbjct: 143 LRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIK 190
>SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 179 VRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSK 322
+R + + I +EAA +N K + LA+EII + K + Y K
Sbjct: 143 LRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIK 190
>SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +2
Query: 140 HKLRKEGYNLDRQVRAIQREEEKIKRSL----KEAATKNDKQ 253
HK +G D +++ EEEK+ R L K+A++ ND Q
Sbjct: 275 HKKSHKGAIQDSSIQSYLDEEEKLSRELDHKTKDASSTNDSQ 316
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 149 RKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEIIR 286
+KE L R+ QRE+EK R ++ A K K++ L KE IR
Sbjct: 92 QKEAERLKREKERQQREQEKKLREQEKIAAKKMKEL-EKLEKERIR 136
>SPAC3A11.04 |||siepin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -2
Query: 339 TELRCALLVYILLIAFLDLMISFASIVHTCLSFLVAASFSDRLIFSSSLW 190
T + + +Y I F + ++FAS +H F+ S L+F+S W
Sbjct: 162 TPAQAIVKIYSKDIEFYEATLAFASKLHGMRWFMYTHKVSAFLVFTSLFW 211
>SPBC6B1.09c |nbs1||Mre11 complex subunit Nbs1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 35 KSCENLSFK*TDIAKMGLFGKSPERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEK 208
K+ ENLS + +FGK PE N S + +K G N ++ +++ +K
Sbjct: 362 KTLENLSIM-DFVQPKQMFGKEPEGYLSNQSNNGSAQNKKSGDNSEKTKNSLKSSSKK 418
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 119 EMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQ 253
E N H L+ L++Q+ IQR+EE++ +L++ A ++ +Q
Sbjct: 14 EYQNVQDHSLQMALEELNQQIEVIQRQEEQL--ALRKKAIEDARQ 56
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 26.2 bits (55), Expect = 3.8
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 104 ERNPKEMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTILAKEII 283
E+ ++ E HK ++ Q+ A ++EEE ++ +KE K+D + + +A II
Sbjct: 148 EKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEAREKRMKE-TFKDDPEEDSNMAWSII 206
Query: 284 RSRK 295
K
Sbjct: 207 HKIK 210
>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1309
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 276 KSSDPGKQSIKYTQVKHISTQYNYK---*RIN-W-VSLTIFFFFFYCLDV 410
K+ + G+Q+++ T KH++ N + +N W +SL IF + CL+V
Sbjct: 896 KALNTGQQAVRLTATKHLAALINSESANDNLNHWAISLLIFQLYDPCLEV 945
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 342 CTELRCALLVYILLIAFLDLMISFASIVHTCLSFLVAAS 226
C+ LR L ILL ++ + TC+ FL+ AS
Sbjct: 91 CSSLRQVYLTMILLTNYMHFDAIIVDQLSTCVPFLLLAS 129
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 86 LFGKSPERNPKEM--VNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVC 259
+FG+ + KE + K+++ +D+ A+ ++ + K T ND+ C
Sbjct: 3100 IFGRDANKLSKEKSRIENGFKKIKETSQGIDKFKEALSDQQNVLFSKTK---TANDRLQC 3156
Query: 260 TILAKEIIRSRK 295
I K+ + ++K
Sbjct: 3157 IIQTKQAVEAKK 3168
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 191 QREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKI 310
+R++E+ + ++E K DK+ LAKE R R+ ++
Sbjct: 581 KRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERL 620
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +2
Query: 119 EMVNEWSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQV 256
E+++ KLR+ L ++RA++RE+++ + +AA K +QV
Sbjct: 414 EVLDNLERKLRQ----LRVEIRALEREKDEASKERLKAARKEAEQV 455
>SPBC1683.06c |||uridine ribohydrolase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 310
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 412 GRAHSPPGVKWLLEPIDIYS 471
G H P V WLL P DIYS
Sbjct: 236 GPLHDPNTVMWLLRP-DIYS 254
>SPAC16E8.10c |||mitochondrial ribosomal protein subunit
S7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 191 QREEEKIKRSLKEAATKNDKQVCTILAKEIIRSRKAINKIYTSKAHLNSVQL 346
QR ++ L E + + K++ + KEII R + + K HL+ + L
Sbjct: 198 QRRRIALQWILGECKSSSPKRLSDRIVKEIIAIRSKTSNCFKKKDHLHRMCL 249
>SPAC7D4.05 |||hydrolase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 101 PERNPKEMVNE-WSHKLRKEGYNLDRQVRAIQREEEKIKRSLKEAATKNDKQVCTIL 268
P P EM E WS+ +K GY + + + ++ ++ + + D+++ T+L
Sbjct: 84 PTPVPAEMAEELWSYFSKKTGYTIHPLLIDFLKRNKEERKYIIGIISNTDERIRTVL 140
>SPCC191.03c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 117
Score = 25.0 bits (52), Expect = 8.7
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +3
Query: 372 LTIFFFFFYCLDVWT 416
+++ F F+C+D+WT
Sbjct: 102 ISVLFQCFFCIDIWT 116
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,376,329
Number of Sequences: 5004
Number of extensions: 44267
Number of successful extensions: 149
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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