Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0439
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    29   0.090
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   4.5  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 29.5 bits (63), Expect = 0.090
 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
 Frame = +2

Query: 122 MVNEWSHKLRKEGYNLDRQVRA-IQREEEKIKRSLKEAATKNDKQ-VCTILAKEI----I 283
           +++  SH L ++    D +  A ++ ++EKI   LKE   K  +Q   T +  +I     
Sbjct: 664 IISGGSHDLARKAKRWDEKHMAQLKLQKEKITEELKEVMKKTRRQGELTTVESQIRGLEN 723

Query: 284 RSRKAINKIYTSKAHLNSVQLQMKN 358
           R + ++N + TSK ++N    Q+++
Sbjct: 724 RLKYSMNDLETSKKNINEYDRQLED 748


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 497 YLKVCGAFTL*MSMGSSNHLTPGG 426
           Y K+CG+     S  S N L+PGG
Sbjct: 165 YQKICGSNIPQASGHSKNSLSPGG 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,798
Number of Sequences: 2352
Number of extensions: 10525
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)