Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0438
         (361 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   1.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   2.5  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   3.3  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    21   4.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   5.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   5.9  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   5.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.9  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   7.7  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   7.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   7.7  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 133 RNFSCIR*CLNKKHGIID 80
           +N  C   C   KHGI+D
Sbjct: 53  QNLKCYLKCFMTKHGILD 70


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 211 PPFFYVKFGDAFLKLL*TTLFRAMI 285
           PP  Y+K  DAF+ +    +F A++
Sbjct: 299 PPVSYLKAVDAFMSVCTVFVFMALM 323


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 260 YNNFRNASPNFT*KNGGKHFNYEYKR 183
           YNN+ N   N+   N   ++N  YK+
Sbjct: 327 YNNYNNNYNNY--NNYNNNYNNNYKK 350


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 130 NFSCIR*CLNKKHGIIDFVFN 68
           NFS    C  +K  IID V+N
Sbjct: 64  NFSWGSECTTRKTRIIDVVYN 84


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 180 ISFVFVVKMFTSIFLCKVW 236
           ++++ + K    I LCK+W
Sbjct: 94  VAYLLLGKWIFGIHLCKLW 112


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 180 ISFVFVVKMFTSIFLCKVW 236
           ++++ + K    I LCK+W
Sbjct: 94  VAYLLLGKWIFGIHLCKLW 112


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -1

Query: 136 FRNFSCIR*CLNKKHGIID 80
           FRN+ C   C+ ++ G+++
Sbjct: 65  FRNYGCFLACIWQQTGVMN 83


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 180 ISFVFVVKMFTSIFLCKVW 236
           ++++ + K    I LCK+W
Sbjct: 94  VAYLLLGKWIFGIHLCKLW 112


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -1

Query: 202 LTTNTKEIIKFYYTKNQ 152
           +TT+ K+++ +Y+ K Q
Sbjct: 287 MTTSRKKVLPYYWYKYQ 303


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 5/23 (21%), Positives = 13/23 (56%)
 Frame = +3

Query: 219 FLCKVWRRVSKIIVNDFVSCYDL 287
           FL + W  +   ++  F++C+ +
Sbjct: 304 FLFRAWESIIVGMIGAFITCFTM 326


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 30 RAEFLQPGGS 1
          + EFL PGGS
Sbjct: 67 KCEFLNPGGS 76


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,714
Number of Sequences: 438
Number of extensions: 2469
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)