Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0437
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88177-7|AAB42288.1|  339|Caenorhabditis elegans Hypothetical pr...    58   6e-09
Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical pr...    58   7e-09
AF038619-4|AAB92074.1|  340|Caenorhabditis elegans Hypothetical ...    56   2e-08
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AF026213-6|AAB71307.1|  655|Caenorhabditis elegans Temporarily a...    30   1.3  
Z81142-6|CAB03508.1|  344|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U64844-8|AAB18308.1|  330|Caenorhabditis elegans Serpentine rece...    27   8.9  

>U88177-7|AAB42288.1|  339|Caenorhabditis elegans Hypothetical
           protein F53E10.1 protein.
          Length = 339

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
 Frame = +3

Query: 426 WTKVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLRDRVVMVIDEK-NNFVTARAFP 602
           W  +G +K ++ YPIKSC PV +   +C+ LG     L DRV ++++E    F+TAR  P
Sbjct: 39  WVPIGIVKGLHIYPIKSCKPVDVFAFKCTKLGPMMEELEDRVFVLVEESTGKFITARQKP 98

Query: 603 ELLTVQPTIRSSILTV 650
           +L+ V+  +   IL +
Sbjct: 99  KLVNVESYMTDGILEI 114


>Z83106-6|CAB05497.2|  339|Caenorhabditis elegans Hypothetical
           protein F22B8.7 protein.
          Length = 339

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = +3

Query: 417 PENWTKVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLRDRVVMVIDEK-NNFVTAR 593
           P  W  VG +K+++ +PIKSC  V +   +C+ LG   G L DR  M+++E    F+TAR
Sbjct: 36  PREWVPVGVVKSLHIFPIKSCKSVDVFAFKCTKLGPVMGDLEDRAFMLVEESTGKFITAR 95

Query: 594 AFPELLTVQPTIRSSILTV 650
             P+L+ V+  +   +L V
Sbjct: 96  QKPKLVHVENYMTDGMLEV 114


>AF038619-4|AAB92074.1|  340|Caenorhabditis elegans Hypothetical
           protein F56A11.5 protein.
          Length = 340

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +3

Query: 402 KKIKIPE-NWTKVGTLKAINAYPIKSCAPVMLEKAECSILGLKDGWLRDRVVMVIDEKNN 578
           KK   P+  W  VG +K+++ YPIKSC    + +  C+  G + G   DR  +VI+    
Sbjct: 33  KKYSKPKAEWVPVGRIKSLHLYPIKSCKGKEVFQYRCTPFGPRLGEYLDRHFLVINSDGK 92

Query: 579 FVTARAFPELLTVQPTIRSSILTVKH 656
           F TAR  P+++ ++  I+  I+ V +
Sbjct: 93  FYTARTKPQMVLIETLIKDGIVRVSY 118


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +3

Query: 57   INLLFDPDVIPDFTKQFN*TISLHYNCTLENI 152
            +NLL D + + +F ++ N  IS+HY  T +N+
Sbjct: 3392 VNLLSDSEWLREFHREVNKRISIHYRYTSDNL 3423


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +3

Query: 57   INLLFDPDVIPDFTKQFN*TISLHYNCTLENI 152
            +NLL D + + +F ++ N  IS+HY  T +N+
Sbjct: 3392 VNLLSDSEWLREFHREVNKRISIHYRYTSDNL 3423


>AF026213-6|AAB71307.1|  655|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 123 protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +1

Query: 175 YLFIRCISFYDRQYNSKVEVST--YFSHSMVFV 267
           YLFI CI F++ +      +ST  YFS++ +FV
Sbjct: 594 YLFIYCIHFFNTKLTISGTISTILYFSYTSIFV 626


>Z81142-6|CAB03508.1|  344|Caenorhabditis elegans Hypothetical
           protein ZK1037.9 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +2

Query: 353 CAWRCLLRLSPVLSRKQEDKNTRKLD*SRNAQSYQRLSN*IM 478
           C    +L L  V+  ++ DKN ++L    NAQ +QR++  ++
Sbjct: 223 CVLFPILSLLLVIEIRKADKNQKRLTAPTNAQDFQRITRLVL 264


>U64844-8|AAB18308.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein213 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 124 FITTVR*KTLILIIGNKYLFIRCISFYDRQYNSKVEVSTYFSH 252
           F+T +    LILI+   Y+ + C+ FY  Q  + + V    SH
Sbjct: 244 FLTQLTIPILILILPIIYIGVSCLVFYHNQAINNITVIIVSSH 286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,956,131
Number of Sequences: 27780
Number of extensions: 238121
Number of successful extensions: 529
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)