Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0433
         (377 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   2.3  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   4.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   4.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   4.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   9.5  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   9.5  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 145 YLRGSILGPFLFLIYINCCKICFC 216
           Y  GS   PFL     + C +C C
Sbjct: 756 YFPGSRFHPFLIPTGFDSCTVCTC 779


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = +3

Query: 168 SFFISNIYKLL 200
           S+FISN+Y++L
Sbjct: 60  SYFISNVYQIL 70


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 175 LFLIYINCCKICFCINLC*KTIDIVTNI 258
           +F   ++CC + F      K I++  NI
Sbjct: 94  VFSSLLSCCSVIFGCIFALKVIEVFKNI 121


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 175 LFLIYINCCKICFCINLC*KTIDIVTNI 258
           +F   ++CC + F      K I++  NI
Sbjct: 94  VFSSLLSCCSVIFGCIFALKVIEVFKNI 121


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 159 GTPEVHPFSTRCLKIY 112
           GTP   P S+RC +++
Sbjct: 291 GTPRTTPASSRCGQLF 306


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 244 YQSFSNINL 218
           YQ+FSN+N+
Sbjct: 117 YQTFSNLNI 125


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/20 (25%), Positives = 10/20 (50%)
 Frame = +1

Query: 142 VYLRGSILGPFLFLIYINCC 201
           ++    +  P   L+Y+ CC
Sbjct: 144 LFFAQGLTSPIFNLVYVYCC 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,990
Number of Sequences: 336
Number of extensions: 2238
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)