Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0433
         (377 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    26   0.40 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   0.70 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   1.6  
AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse t...    24   2.1  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   2.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   2.8  
AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse t...    23   4.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   8.6  

>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +3

Query: 21  NYITMVLGMVHWK*VTSYLSGRIQTVDVKGNRSSGTVLKMGVPQG 155
           N +     +V W  + SYL  R   V +  + S   V   GVPQG
Sbjct: 89  NKVRFPCSLVQW--LKSYLINRTYIVKIDKHMSKKIVSSSGVPQG 131


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 45  MVHWK*VTSYLSGRIQTVDVKGNRSSGTVLKMGVPQGFHSG 167
           +V W  + SYL  R   V +  + S   V   GVPQG + G
Sbjct: 712 LVQW--LKSYLIHRTYIVKIDKHMSKEIVSSSGVPQGSNIG 750



 Score = 24.2 bits (50), Expect = 1.6
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 151 RGSILGPFLFLIYIN 195
           +GS +GP LF+++IN
Sbjct: 745 QGSNIGPLLFILFIN 759


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 286 NNQLIFYPSSPNLIYIMR*PRLT 354
           NN L FY  S NL+Y  + P  T
Sbjct: 292 NNLLKFYTESGNLLYTAKIPNST 314


>AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 45  MVHWK*VTSYLSGRIQTVDVKGNRSSGTVLKMGVPQG 155
           +V W  + SYL GR  +V +  + S       GVPQG
Sbjct: 97  LVAW--LRSYLMGRTYSVRMGPHLSRSLRASSGVPQG 131


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 148 GTPIFNTVPEDLLPFTSTV 92
           GTP   T+P  + P TSTV
Sbjct: 402 GTPSTTTMPPSVAPTTSTV 420


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 42  GMVHWK*VTSYLSGRIQTVDVKGNRSSGTVLKMGVPQG 155
           G++ W  ++SYLS R   V      S       GVPQG
Sbjct: 640 GIISW--LSSYLSNRSCRVKTGSYLSEEFFCTSGVPQG 675


>AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 45  MVHWK*VTSYLSGRIQTVDVKGNRSSGTVLKMGVPQG 155
           +V W  + SYL GR  +V +  + S       GVPQG
Sbjct: 97  LVAW--LRSYLMGRTYSVRMGPHLSRFLRASSGVPQG 131


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -3

Query: 141 PFST-RCLKIYYLLHQLFVSFLI 76
           PF+  R + IY L+H LF  F+I
Sbjct: 137 PFNPIRRVAIYILVHPLFSLFII 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,687
Number of Sequences: 2352
Number of extensions: 7924
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)