Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0433
         (377 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    29   0.83 
Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical pr...    26   7.8  
Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical p...    26   7.8  
Z81054-9|CAB02883.2|  540|Caenorhabditis elegans Hypothetical pr...    26   7.8  

>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 0.83
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 151 RGSILGPFLFLIYIN 195
           +GS+ GPFLFLI+IN
Sbjct: 59  KGSVSGPFLFLIFIN 73


>Z93378-6|CAB07586.1| 1049|Caenorhabditis elegans Hypothetical
           protein C01G12.8 protein.
          Length = 1049

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 136 KWVYLRGSILGPFLFLIY 189
           KW+ L GSI G F FL++
Sbjct: 104 KWIKLAGSIFGGFNFLLW 121


>Z81457-11|CAB03818.1| 1049|Caenorhabditis elegans Hypothetical
           protein C01G12.8 protein.
          Length = 1049

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 136 KWVYLRGSILGPFLFLIY 189
           KW+ L GSI G F FL++
Sbjct: 104 KWIKLAGSIFGGFNFLLW 121


>Z81054-9|CAB02883.2|  540|Caenorhabditis elegans Hypothetical
           protein F01D4.1 protein.
          Length = 540

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -1

Query: 317 GEDG*KINWLF*HDNKLKLIIFVTISIVF*HKFIQKHILQQFIYIRNKK 171
           G D   IN  F     L LI F+ I   F  KF+  H+   F Y+R +K
Sbjct: 491 GIDSNSINVDFIAYYYLDLIAFLLIVAYF-AKFLVSHVYSYFCYLRKEK 538


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,849,835
Number of Sequences: 27780
Number of extensions: 184658
Number of successful extensions: 329
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)