Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0431
         (545 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668...    84   8e-17
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659...    83   1e-16
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234...    81   7e-16
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567...    80   1e-15
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350...    76   2e-14
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934...    64   5e-11
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919...    55   4e-08
07_03_0767 - 21360999-21361157,21361185-21361274,21361413-213615...    29   2.4  
05_02_0090 + 6507378-6507481,6507495-6507627,6507658-6507715,650...    29   3.2  
09_04_0433 - 17512299-17512340,17512832-17512838,17513389-175135...    28   5.6  
06_03_0746 - 24111579-24112348,24113164-24113256,24113355-241134...    28   5.6  
07_01_0921 + 7753744-7753821,7753921-7754856,7755285-7755377,775...    27   7.4  

>03_06_0253 - 32666152-32666360,32666443-32666632,32666764-32666862,
            32666999-32667094,32667408-32668361,32668683-32668901,
            32669282-32669491,32669617-32669879,32670041-32671717,
            32672702-32672852
          Length = 1355

 Score = 83.8 bits (198), Expect = 8e-17
 Identities = 44/141 (31%), Positives = 74/141 (52%)
 Frame = +3

Query: 33   VIEGSMKIHAQYHYTMGERKHLWQLLLQDGLEIYSSTQWLDLTNIAIAKCLDMPVNSINI 212
            +I+G +K+ +QY++ M  +  L      + + +Y S Q  ++T   +A+CL +P +++ I
Sbjct: 763  IIDGEVKLESQYYFYMETQTALAIPDEDNCITLYVSAQLPEITQNTVARCLGIPYHNVRI 822

Query: 213  IVRRLGGGYGSKITRASQIACAAACVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIG 392
            I RR+GGG+G K  +A  +A A A     L R  R  L  +T+M   G R P   ++ +G
Sbjct: 823  ITRRVGGGFGGKAMKAIHVAAACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKVKYSVG 882

Query: 393  VNKAGRIQNLKNTFYQDGGCS 455
                G+I  L      +GG S
Sbjct: 883  FKSDGKITGLHFDLGMNGGIS 903


>07_01_1146 + 10756897-10757065,10763869-10765521,10765638-10765900,
            10766057-10766266,10766818-10767036,10767379-10768344,
            10768575-10768670,10768772-10768870,10769349-10769538,
            10769623-10769855
          Length = 1365

 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 45/141 (31%), Positives = 72/141 (51%)
 Frame = +3

Query: 33   VIEGSMKIHAQYHYTMGERKHLWQLLLQDGLEIYSSTQWLDLTNIAIAKCLDMPVNSINI 212
            ++   +K+ +QY++ M  +  L      + + +YSS+Q+ +L    I+KCL +P N++ +
Sbjct: 761  IMSEEVKLASQYYFYMETQTALAIPDEDNTMTVYSSSQFPELAQNVISKCLGIPFNNVRV 820

Query: 213  IVRRLGGGYGSKITRASQIACAAACVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIG 392
            I RR GGG+G K  R+  IA AAA     L R  R  L   T+M  +G R P    + +G
Sbjct: 821  ITRRAGGGFGGKAVRSLHIATAAALCAHTLRRPVRMYLNRNTDMIMVGGRHPMKARYSVG 880

Query: 393  VNKAGRIQNLKNTFYQDGGCS 455
                G+I  L      + G S
Sbjct: 881  FKSDGKITALHLDLLINAGIS 901


>10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,
            2343027-2343236,2343436-2343654,2344038-2345000,
            2345279-2345374,2345482-2345580,2345953-2346142,
            2346594-2346823
          Length = 1358

 Score = 80.6 bits (190), Expect = 7e-16
 Identities = 41/130 (31%), Positives = 71/130 (54%)
 Frame = +3

Query: 33   VIEGSMKIHAQYHYTMGERKHLWQLLLQDGLEIYSSTQWLDLTNIAIAKCLDMPVNSINI 212
            +I+G +K+ +QY++ M  +  L      + + +Y S Q  ++T   +A+CL +P +++ I
Sbjct: 756  IIDGEVKLGSQYYFYMETQTALAFPDEDNCITVYCSAQMPEVTQDIVARCLGVPFHNVRI 815

Query: 213  IVRRLGGGYGSKITRASQIACAAACVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIG 392
            I RR+GGG+G K  +A+ +A A A     L R  R  L  +T+M   G R P   ++ +G
Sbjct: 816  ITRRVGGGFGGKAMKATHVATACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKAKYSVG 875

Query: 393  VNKAGRIQNL 422
                G+I  L
Sbjct: 876  FKSDGKITAL 885


>03_06_0252 - 32656068-32656276,32656361-32656550,32656682-32656780,
            32656917-32657012,32657200-32658153,32658476-32658694,
            32658911-32659120,32659241-32659503,32659605-32661281,
            32663639-32663792
          Length = 1356

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 41/130 (31%), Positives = 70/130 (53%)
 Frame = +3

Query: 33   VIEGSMKIHAQYHYTMGERKHLWQLLLQDGLEIYSSTQWLDLTNIAIAKCLDMPVNSINI 212
            +I+G +K+ +QY++ M  +  L      + + +Y S Q  ++T   +A+CL +P +++ I
Sbjct: 764  IIDGEVKLESQYYFYMETQTALAIPDEDNCITLYVSAQLPEITQNTVARCLGIPYHNVRI 823

Query: 213  IVRRLGGGYGSKITRASQIACAAACVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIG 392
            I RR+GGG+G K  +A  +A A A     L R  R  L  +T+M   G R P   ++ +G
Sbjct: 824  ITRRVGGGFGGKAMKAIHVATACAVAAFKLRRPVRMYLDRKTDMIMAGGRHPMKVKYSVG 883

Query: 393  VNKAGRIQNL 422
                G+I  L
Sbjct: 884  FKSDGKITGL 893


>07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,
            3505561-3505653,3505926-3506891,3507267-3507485,
            3508038-3508247,3508371-3508630,3508956-3510737,
            3510796-3511009
          Length = 1414

 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 44/158 (27%), Positives = 75/158 (47%)
 Frame = +3

Query: 48   MKIHAQYHYTMGERKHLWQLLLQDGLEIYSSTQWLDLTNIAIAKCLDMPVNSINIIVRRL 227
            + +H+QY++ M  +  L      + + +YSS+Q  ++    IAKCL +P +++ +I RR+
Sbjct: 823  VNLHSQYYFYMETQTALAIPEEDNCMVVYSSSQCPEVAQETIAKCLGLPCHNVRVITRRV 882

Query: 228  GGGYGSKITRASQIACAAACVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIGVNKAG 407
            GGG+G K  R+  +A A A     L R  R  L  +T+M   G R P    + +G    G
Sbjct: 883  GGGFGGKAVRSLPVATACALSAFKLQRPVRIYLDRKTDMIMTGGRHPMKIRYSVGFKSDG 942

Query: 408  RIQNLKNTFYQDGGCSFNEVLTPLTVKHFQNCYDSKRW 521
             I  L      + G    + ++P+   +F        W
Sbjct: 943  NITALHIELLVNAG--ITQDVSPVIPHNFIEALKKYNW 978


>03_04_0157 + 17791540-17791681,17792809-17792908,17793386-17793477,
            17793562-17793620,17794135-17795637,17796478-17796720,
            17796831-17797145,17797571-17797573,17798399-17798638,
            17798975-17799259,17799335-17799556,17800105-17800266,
            17800411-17800545,17802452-17802688,17802787-17802960,
            17803692-17803934
          Length = 1384

 Score = 64.5 bits (150), Expect = 5e-11
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
 Frame = +3

Query: 33   VIEGSMKIHAQYHYTMGERKHL-WQLLLQDGLEIYSSTQWLDLTNIA-IAKCLDMPVNSI 206
            +IEG +++  Q H+ M  +  L W +   + + + SSTQ     +   +A  L +P + +
Sbjct: 780  IIEGKVQVGGQEHFYMEPQSTLVWPVDSGNEIHMISSTQKAPQKHQKYVANVLGLPQSRV 839

Query: 207  NIIVRRLGGGYGSKITRASQIACAAACVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFE 386
                +R+GGG+G K TR++  A AA+     L +  + +L    +M   G+R     +++
Sbjct: 840  VCKTKRIGGGFGGKETRSAIFAAAASVAAYCLRQPVKLVLDRDIDMMTTGQRHSFLGKYK 899

Query: 387  IGVNKAGRIQNLKNTFYQDGGCSFNEVLTPL--TVKHFQNCYD 509
            +G    G+I  L    Y +GG S +  L  L   + H  N YD
Sbjct: 900  VGFTDDGKILALDLDVYNNGGHSHDLSLPVLERAMFHSDNVYD 942


>07_01_1149 +
           10789733-10791209,10791326-10791588,10791745-10791954,
           10792398-10792475,10792505-10792705,10792768-10792908,
           10794749-10795714,10797824-10797919,10798450-10798638,
           10798849-10798956
          Length = 1242

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 24/73 (32%), Positives = 44/73 (60%)
 Frame = +3

Query: 30  TVIEGSMKIHAQYHYTMGERKHLWQLLLQDGLEIYSSTQWLDLTNIAIAKCLDMPVNSIN 209
           ++    +K+ +QY++ M  +  L      + + +YSS+Q+ +L    I+KCL +P N++ 
Sbjct: 671 SITSSHVKLSSQYYFYMETQTALAIPDEDNTMTVYSSSQFSELAQNVISKCLGIPFNNVR 730

Query: 210 IIVRRLGGGYGSK 248
           +I RR GGG+G K
Sbjct: 731 VITRRAGGGFGGK 743



 Score = 34.7 bits (76), Expect = 0.049
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = +3

Query: 261 SQIACAAACVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEFEIGVNKAGRIQNLKNTFYQ 440
           +QIA AAA     L R  R  L   T+M  +G R P    + +G    G+I  L      
Sbjct: 789 TQIATAAALCAHMLRRPVRMYLNRNTDMIMVGGRHPMKARYSVGFKPDGKITALHLDLLI 848

Query: 441 DGGCS 455
           + G S
Sbjct: 849 NAGIS 853


>07_03_0767 -
           21360999-21361157,21361185-21361274,21361413-21361563,
           21361650-21361887,21361984-21362191,21362442-21362462,
           21363884-21364011,21364108-21364245,21364820-21365654
          Length = 655

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 243 SKITRASQIACAAACVTRFLGRTCRFILPLQTNMKAIGKRIPTNCEF 383
           + ITRA+ +    A V   L  T R+ +   T M A G+R+ ++  F
Sbjct: 147 TNITRAADVRAYDAAVVSLLNATVRYAVENSTRMFATGQRVGSDPGF 193


>05_02_0090 +
           6507378-6507481,6507495-6507627,6507658-6507715,
           6508756-6508814,6509127-6509169,6509325-6509422,
           6509619-6509744
          Length = 206

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 389 WRKQSW*NSKSQKYILSRRWMFL**SPHPSNS*TFPELLR 508
           W  Q W  SK +K+  +  W+F   S H +     PE+LR
Sbjct: 81  WSTQRWTKSKKRKWKRADEWLFPHNSCHFAELVIMPEMLR 120


>09_04_0433 -
           17512299-17512340,17512832-17512838,17513389-17513574,
           17513656-17513819,17514732-17514837,17514922-17515013,
           17515277-17515390,17515399-17515528,17515604-17515765,
           17516460-17516512,17516605-17516697
          Length = 382

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 33  VIEGSMKIHAQYHYTMGERKHLWQLLLQDGLEIYSSTQWL---DLTNIAIAKC 182
           V EG++ +H  Y+  +      W+L+ + GLE  S+  W     + +I IA C
Sbjct: 270 VNEGTLSLHGGYYNFIDCTFEKWKLVYRQGLEGGSNLAWFCFATVLSIFIALC 322


>06_03_0746 -
           24111579-24112348,24113164-24113256,24113355-24113460,
           24113587-24113783,24113893-24114103,24114198-24114273,
           24114347-24114426,24114659-24114754,24114894-24114965,
           24115067-24115264,24115273-24115569
          Length = 731

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 252 TRASQIACAAACVTRFLGRTCRFILPLQTNMKAI 353
           T A  + C+  C+   +  +C F+LPL   M+ +
Sbjct: 71  TMAMNLICSCKCLNEVMKISCAFLLPLHRIMQGL 104


>07_01_0921 +
           7753744-7753821,7753921-7754856,7755285-7755377,
           7755462-7755815
          Length = 486

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 132 YSSTQWLDLTNIAIAKCLDMPVNSINIIVRRLGGGYGS 245
           +S   W+      ++K  D P N INI + R+G  Y S
Sbjct: 7   FSDLLWMPHCQHKVSKIWDSPTNCINIRLHRVGIPYHS 44


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,634,299
Number of Sequences: 37544
Number of extensions: 291431
Number of successful extensions: 641
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)