Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0431
(545 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0) 83 1e-16
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 80 1e-15
SB_27644| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=3.1e-26) 64 7e-11
SB_55654| Best HMM Match : Toxin_7 (HMM E-Value=9.7) 53 2e-07
SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36) 29 2.5
SB_6602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_43084| Best HMM Match : ig (HMM E-Value=9.7e-23) 28 5.7
SB_25078| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0)
Length = 817
Score = 83.0 bits (196), Expect = 1e-16
Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Frame = +3
Query: 3 AGDSGSDISTVIEGSMKIHAQYHYTMGERKHLWQLLLQDG-LEIYSSTQWLDLTNIAIAK 179
AG SD VIEG M+ AQ H+ + + +DG +E++ STQ T +A
Sbjct: 161 AGFRASD--HVIEGEMRTGAQEHFYLETHATIAVPKGEDGEMELFCSTQNPTTTQSMVAA 218
Query: 180 CLDMPVNSINIIVRRLGGGYGSKITRASQIACAAACVTRFLGRTCRFILPLQTNMKAIGK 359
L + N I + V+R+GGG+G K TR+ ++ A G+ R +L +MK G
Sbjct: 219 VLGVQRNRIVVRVKRMGGGFGGKETRSCWLSAVVAVAASRTGKPVRCMLDRDEDMKTGGT 278
Query: 360 RIPTNCEFEIGVNKAGRIQNLKNTFYQDGGCS--FNEVLTPLTVKHFQNCY 506
R P +++G K GRIQ L Y + G S + + V H +NCY
Sbjct: 279 RHPFLARYKVGFTKDGRIQALDIQLYNNAGHSLDLSRAVMERAVCHSENCY 329
>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
Length = 1644
Score = 79.8 bits (188), Expect = 1e-15
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Frame = +3
Query: 27 STVIEGSMKIHAQYHYTMGERKHLWQLLLQDGLEIYSSTQWLDLTNIAIAKCLDMP---- 194
S V+ G + AQ+H+ M E + + +DG+ I+ ++Q DL A+ K L MP
Sbjct: 1354 SHVVTGEVSCGAQHHFHM-ETQVALTVPGEDGITIFCASQGTDLIQSAVCKVLGMPAKKD 1412
Query: 195 ------------VNSINIIVRRLGGGYGSKITRASQIACAAACVTRFLGRTCRFILPLQT 338
V S++++ RR GG +G+K TRA+ IACA+A + L R R +
Sbjct: 1413 HTPNQSPIFVCPVCSVDVVTRRCGGAFGAKATRAAPIACASALAAKILDRPVRLKMNFNK 1472
Query: 339 NMKAIGKRIPTNCEFEIGVNKAGRIQNLKNTFYQDGGCS 455
N+++IG R P +++ N G +Q + +Y + GC+
Sbjct: 1473 NLESIGGRSPYLLKYKAAFNDDGVLQAVDMDYYINTGCT 1511
>SB_27644| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=3.1e-26)
Length = 274
Score = 64.1 bits (149), Expect = 7e-11
Identities = 30/97 (30%), Positives = 54/97 (55%)
Frame = +3
Query: 171 IAKCLDMPVNSINIIVRRLGGGYGSKITRASQIACAAACVTRFLGRTCRFILPLQTNMKA 350
+A+ L +P++ + I +R+GG +G K+T S IA A V + GR R L ++K
Sbjct: 174 VARNLGVPLSKVVIRTKRVGGAFGGKLTNGSAIAATVAVVAQKSGRAARLALSQTEDIKT 233
Query: 351 IGKRIPTNCEFEIGVNKAGRIQNLKNTFYQDGGCSFN 461
GKR ++++G G++Q L+ +Y +GG + +
Sbjct: 234 TGKRGDYLVKYKVGFTDEGKLQALEAVYYGNGGSALD 270
>SB_55654| Best HMM Match : Toxin_7 (HMM E-Value=9.7)
Length = 194
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +3
Query: 306 RTCRFILPLQTNMKAIGKRIPTNCEFEIGVNKAGRIQNLKNTFYQDGGCSFNEVLTPLTV 485
R R ++ TNMK +GKR P ++++G + +G ++ + T Y D GCS N+ T
Sbjct: 54 RPVRMMMNFNTNMKMVGKRTPYLVKYKVGTDDSGTLKGIDMTMYADYGCSVNDSDMGSTY 113
Query: 486 KHFQNCYDSKRWFIQS 533
N Y W I +
Sbjct: 114 NFCDNAYYCANWKINA 129
>SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36)
Length = 888
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 41 RLYENSCTIPLYDGRTQTSVATPTAGWLRDLLFNAMAR 154
R Y +SC PLYD S A A L D L +A+ R
Sbjct: 152 RYYNSSCDDPLYDPVAMKSFADKHAPGLFDQLLSAITR 189
>SB_6602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -2
Query: 274 QAI*LARVILLPYPPPNRRTMMLILLTGISKHFAIAML 161
+AI R++ P+PPP + + L +S+H + L
Sbjct: 23 KAICCGRMVECPFPPPGSKASHKVKLIDVSRHIKVCPL 60
>SB_43084| Best HMM Match : ig (HMM E-Value=9.7e-23)
Length = 960
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 102 QLLLQDGLEIYSSTQWLDLTNIAIAKCL 185
++++ DG SS W ++ +AIA CL
Sbjct: 567 EIMIVDGRRNVSSADWRNINQLAIANCL 594
>SB_25078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 159 LNRAIALKSKSLSHPAVGVATDVCVLPSYNGIVHEFS*SLQ 37
+N I++ LS+ + + DV ++PS + H FS ++Q
Sbjct: 1 MNHRISMTKVRLSNQKLEIEADVSLVPSIELLTHAFSCTMQ 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,815,785
Number of Sequences: 59808
Number of extensions: 328337
Number of successful extensions: 689
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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