Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0430
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-13|CAA86748.1| 281|Caenorhabditis elegans Hypothetical p... 143 7e-35
AC024779-2|AAK68485.1| 299|Caenorhabditis elegans Serpentine re... 33 0.11
AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine re... 33 0.11
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 31 0.56
AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of ... 29 3.0
AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of ... 29 3.0
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 29 3.0
U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical pr... 28 4.0
U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical pr... 28 4.0
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z49068-7|CAA88859.1| 552|Caenorhabditis elegans Hypothetical pr... 27 6.9
>Z46787-13|CAA86748.1| 281|Caenorhabditis elegans Hypothetical
protein C16C10.10 protein.
Length = 281
Score = 143 bits (347), Expect = 7e-35
Identities = 64/123 (52%), Positives = 84/123 (68%)
Frame = +2
Query: 185 VSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYG 364
++ RALH+VFKVA+R T F+ +L MKVLRHEEF +GCEA CNGPY RWSKTM+GYG
Sbjct: 1 MTARALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYG 60
Query: 365 PEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGLKYVEAPGG 544
ED HFV+E+TYNY + YE GND+ I + S + ++ + N K G V+ P G
Sbjct: 61 SEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-KSGCGRLAVKDPDG 119
Query: 545 YKF 553
++F
Sbjct: 120 HEF 122
>AC024779-2|AAK68485.1| 299|Caenorhabditis elegans Serpentine
receptor, class x protein50, isoform a protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.11
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = -2
Query: 337 SVCIRSIASCLASFTKLFMAENL----HSEDFPIKFCC*SPICDFKYEMKSTTANHFAI* 170
++ IR + S SF +L ++++ HS F F SP+C F E+ T ++ F
Sbjct: 7 ALLIRRLPSLKNSFGRLTASQSIGDAIHSTVFAFIF---SPMCFFSVEIMKTYSSAFGHI 63
Query: 169 QL*AYDFSSELSDLC--NDKLCSVVCVI 92
L AYD S+ S LC ++ CS+V I
Sbjct: 64 LLIAYDIST-YSHLCISLNRFCSIVAPI 90
>AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine
receptor, class x protein50, isoform b protein.
Length = 304
Score = 33.5 bits (73), Expect = 0.11
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = -2
Query: 337 SVCIRSIASCLASFTKLFMAENL----HSEDFPIKFCC*SPICDFKYEMKSTTANHFAI* 170
++ IR + S SF +L ++++ HS F F SP+C F E+ T ++ F
Sbjct: 18 ALLIRRLPSLKNSFGRLTASQSIGDAIHSTVFAFIF---SPMCFFSVEIMKTYSSAFGHI 74
Query: 169 QL*AYDFSSELSDLC--NDKLCSVVCVI 92
L AYD S+ S LC ++ CS+V I
Sbjct: 75 LLIAYDIST-YSHLCISLNRFCSIVAPI 101
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 31.1 bits (67), Expect = 0.56
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 377 HFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTN 490
H +++L +N H + GND++ +SSE ++A N
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGN 1451
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 31.1 bits (67), Expect = 0.56
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 377 HFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTN 490
H +++L +N H + GND++ +SSE ++A N
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGN 1451
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 31.1 bits (67), Expect = 0.56
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 377 HFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTN 490
H +++L +N H + GND++ +SSE ++A N
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGN 1451
>AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform b protein.
Length = 218
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 286 FMAENLHSEDFPIKFCC*SPICDFKYEMKS--TTANH 182
++ LHS+D P K +CD KY+ + ANH
Sbjct: 180 YLHSGLHSDDIPFKCSLCGSLCDGKYDFAAHLVYANH 216
>AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform c protein.
Length = 175
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 286 FMAENLHSEDFPIKFCC*SPICDFKYEMKS--TTANH 182
++ LHS+D P K +CD KY+ + ANH
Sbjct: 137 YLHSGLHSDDIPFKCSLCGSLCDGKYDFAAHLVYANH 173
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 286 FMAENLHSEDFPIKFCC*SPICDFKYEMKS--TTANH 182
++ LHS+D P K +CD KY+ + ANH
Sbjct: 224 YLHSGLHSDDIPFKCSLCGSLCDGKYDFAAHLVYANH 260
>U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical
protein D1009.3b protein.
Length = 463
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 272 VLRHEEFSEGCEAACNGPYANRW-SKTMVGYGPEDTHFVVELT 397
+LR E E C+ C+ +AN W + V +G + + +++T
Sbjct: 307 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQIT 349
>U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical
protein D1009.3a protein.
Length = 465
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 272 VLRHEEFSEGCEAACNGPYANRW-SKTMVGYGPEDTHFVVELT 397
+LR E E C+ C+ +AN W + V +G + + +++T
Sbjct: 309 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQIT 351
>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
protein F21H12.6 protein.
Length = 1374
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 320 GPYANRWSKTMVGYGPEDTHFVVELTYNYG--VTHYEQGNDFLGITVQSSESLKRAQTNN 493
GP N WSK++ G + V ++ G + DF G+ +S SL TN
Sbjct: 766 GPIGNEWSKSITVQGGKTLEACVVRAWSRGKNPVDVDMTIDFFGVKKPTSISLIHGATNT 825
Query: 494 WPIK 505
PI+
Sbjct: 826 -PIR 828
>Z49068-7|CAA88859.1| 552|Caenorhabditis elegans Hypothetical
protein K01C8.8 protein.
Length = 552
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 170 LNSKMVSGRALHFVFKVADRTLTAKFYREILGMK 271
+N+K+ GR+L F FK ++ + F+ + G++
Sbjct: 377 INTKICRGRSLDFRFKTISKSSSMDFFTTVSGLE 410
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,347,626
Number of Sequences: 27780
Number of extensions: 248728
Number of successful extensions: 539
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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