Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0430
         (557 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   3.7  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   3.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.4  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +2

Query: 347 TMVGYGPEDTHFVVELTYNYGVTHY-EQGNDFL 442
           T+V  GPE        TY Y  + Y  QG+  L
Sbjct: 242 TIVNNGPEAAKMAKAFTYTYNYSMYWGQGHAIL 274


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 513 LCSLIGQLLVCALFRLSLDCTVMPRKSF 430
           L  L+G ++  ++F+  +   + PR SF
Sbjct: 191 LLMLVGMVMYISVFKAEVGSKLRPRSSF 218


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 157 YDFSSELSDLCNDKLCSVVCVII 89
           Y F S L D CN     +VC I+
Sbjct: 352 YVFRSALEDYCNIVATHLVCGIL 374


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 443 QGNHFLVRNALHHSCRSVQQQNVYLQG 363
           Q +H L  N+   S +S QQQ   LQG
Sbjct: 808 QSHHGLHINSSPSSVQSGQQQQSVLQG 834


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,308
Number of Sequences: 438
Number of extensions: 3578
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)