Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0429
         (574 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22YH5 Cluster: Zinc finger protein; n=1; Tetrahymena t...    36   0.68 
UniRef50_Q8II25 Cluster: Putative uncharacterized protein; n=1; ...    35   1.2  
UniRef50_A2E822 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  

>UniRef50_Q22YH5 Cluster: Zinc finger protein; n=1; Tetrahymena
           thermophila SB210|Rep: Zinc finger protein - Tetrahymena
           thermophila SB210
          Length = 318

 Score = 35.9 bits (79), Expect = 0.68
 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 376 EICRG*YKLQIEKKIDPSPKSKLNLESPKKSVTLKYMMIIIIINLYGSCAKTKVI-NYFL 552
           E+C+  Y+L I K++  +P + +  ++ +K   L ++++I  ++ Y S    K I  Y  
Sbjct: 143 ELCQSKYRLSISKRVYFNPANYIKQKATQKKKILMFLVVIFALSFYTSYVVNKHIKEYIC 202

Query: 553 YRKS 564
           Y+ S
Sbjct: 203 YQNS 206


>UniRef50_Q8II25 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1060

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 394 YKLQIEKKIDPSPKSKLNLESPKKSVTLKYMMII-IIINLYGSCAKTK 534
           YK+  E   D S ++K NL S  +S  LKY+  I II NLY  C K K
Sbjct: 613 YKMLCEHNCDGSNENKNNLLSIFESSNLKYLWRIPIINNLYNLCCKDK 660


>UniRef50_A2E822 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 176

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
 Frame = +1

Query: 88  ILTLFRF-YLLLPFHISLINVI--KY*YALTQLLENSYTSSANASLDF-MNIASFISSKV 255
           ILT  ++ Y  +  +I ++N I  KY ++   LL++ Y S  +  L   ++I S ISS+V
Sbjct: 54  ILTAIQYNYGSVALYIKILNQILAKYAFSYKNLLQDRYISGISQRLRLNISINSDISSQV 113

Query: 256 KFNRG 270
            FNRG
Sbjct: 114 DFNRG 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,321,098
Number of Sequences: 1657284
Number of extensions: 7895539
Number of successful extensions: 15580
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15572
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)