Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0429
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    27   0.11 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.9  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 22/83 (26%), Positives = 37/83 (44%)
 Frame = -3

Query: 482 YFKVTLFLGDSRFSFDFGLGSIFFSICNLY*PLQIS*VFSFLKCRLFVSQNHF*KRLEFY 303
           Y  VT ++  +    D    +I   +C+LY  LQI+ + ++        +N F K L+ Y
Sbjct: 142 YLSVTCYVTYAWSPIDHTESNIINDMCSLYYILQITLIVNY----ALALKNRF-KELQKY 196

Query: 302 NKI*KYVTYYGPLLNFTLELMKL 234
            KI     Y G L      +M++
Sbjct: 197 LKIETSCRYVGTLYRILTTMMEM 219


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +2

Query: 107 FICYCRFTFH*LMSLNINMH 166
           ++ +C F FH ++ +N+ +H
Sbjct: 667 WLFHCHFLFHIVIGMNLIIH 686


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 406 FVICINLYKFPRFFLF*NVGYLLVRIIF 323
           F++CI  +  P FFL     +    IIF
Sbjct: 129 FLLCIYYFVVPLFFLLCIYYFYCAFIIF 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,909
Number of Sequences: 336
Number of extensions: 2401
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)