Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0429
         (574 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10401-1|AAA19058.1|  131|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AC024090-3|AAK67220.3|  370|Caenorhabditis elegans Hypothetical ...    27   7.2  

>U10401-1|AAA19058.1|  131|Caenorhabditis elegans Hypothetical
           protein T20B12.5 protein.
          Length = 131

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -3

Query: 359 LKCRLFVSQNHF*KRLEFYNKI*KYVTYYGPLLNFTLELMKLAIFI 222
           ++C LF +QN F  +LE Y    KY  Y  PLL   + L  L I +
Sbjct: 81  IRCPLFHAQNIFNSKLEKYECTFKY--YSNPLLVNVIILFGLRISV 124


>AC024090-3|AAK67220.3|  370|Caenorhabditis elegans Hypothetical
           protein C52E2.6 protein.
          Length = 370

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 418 IDPSPKSKLNLESPKKSVTLKYMMIIIIINLYGSC 522
           I P+    LN+ES    V L ++M II+ +  G C
Sbjct: 74  ISPTSGKLLNIESGNVRVVLDHLMAIIVWSANGCC 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,730,393
Number of Sequences: 27780
Number of extensions: 204032
Number of successful extensions: 429
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)