Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0426
         (549 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0D0Q3 Cluster: Chromosome undetermined scaffold_33, wh...    35   1.4  

>UniRef50_A0D0Q3 Cluster: Chromosome undetermined scaffold_33, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_33,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 836

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
 Frame = +2

Query: 59  FCKSTFGSIMFKILFR*KNLSL*CIKYCVNFKITKPNYLN------KDLIVVAY----LL 208
           F    FG   F      KNL + C+ YC+ +K+ + N+L       KDL +  +    +L
Sbjct: 497 FSGQCFGQYSFFTGQENKNL-IKCLDYCLLYKLNRENFLKIISSNVKDLEIANFIKDQIL 555

Query: 209 FN*NK*FSGSLCIYCVVKKY 268
           FN N     S+C+YC  K +
Sbjct: 556 FNNNYSIIDSICLYCQDKTH 575


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,435,579
Number of Sequences: 1657284
Number of extensions: 6983766
Number of successful extensions: 9669
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 9492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9668
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)