Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0424
         (495 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    26   0.19 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    26   0.19 
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   2.4  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   2.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   7.2  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +2

Query: 158 YDHTTMEQGSWGTDFR-RGFEVAHDL---FGVYATDVYTDEAIKVVNSHNKSEPLFLMLA 325
           YD   +E+G      + R +++   L   +G +  D+YT+E++  ++S      + L L 
Sbjct: 31  YDFYPLERGELTNSGKMREYQLGQFLRERYGDFLGDIYTEESVSALSSFYDRTKMSLQLV 90

Query: 326 HSAVHSGN 349
            +A++  N
Sbjct: 91  LAALYPPN 98


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +2

Query: 158 YDHTTMEQGSWGTDFR-RGFEVAHDL---FGVYATDVYTDEAIKVVNSHNKSEPLFLMLA 325
           YD   +E+G      + R +++   L   +G +  D+YT+E++  ++S      + L L 
Sbjct: 46  YDFYPLERGELTNSGKMREYQLGQFLRERYGDFLGDIYTEESVSALSSFYDRTKMSLQLV 105

Query: 326 HSAVHSGN 349
            +A++  N
Sbjct: 106 LAALYPPN 113


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 184 IVGNRLQERFRGSSR 228
           +VG+ L++RF G+SR
Sbjct: 6   VVGDNLKDRFDGASR 20


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 184 IVGNRLQERFRGSSR 228
           +VG+ L++RF G+SR
Sbjct: 7   VVGDNLKDRFDGASR 21


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 53  FGGEMASRGGYKKEYLPLNRGF 118
           FG +    G Y + YLP+ + F
Sbjct: 435 FGRKADPNGDYIRRYLPVLKNF 456


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,270
Number of Sequences: 438
Number of extensions: 3310
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)