Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0424
(495 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 29 1.3
At1g78500.1 68414.m09150 pentacyclic triterpene synthase, putati... 29 2.3
At5g59190.1 68418.m07418 subtilase family protein contains simil... 28 3.0
At2g47430.1 68415.m05920 cytokinin-responsive histidine kinase (... 28 3.0
At2g28310.2 68415.m03438 expressed protein contains Pfam profile... 28 4.0
At2g28310.1 68415.m03437 expressed protein contains Pfam profile... 28 4.0
At4g15340.1 68417.m02346 pentacyclic triterpene synthase (04C11)... 27 5.3
At1g21430.1 68414.m02680 flavin-containing monooxygenase family ... 27 5.3
At2g05990.2 68415.m00652 enoyl-[acyl-carrier protein] reductase ... 27 6.9
At2g05990.1 68415.m00651 enoyl-[acyl-carrier protein] reductase ... 27 6.9
At4g28720.1 68417.m04108 flavin-containing monooxygenase family ... 27 9.2
At4g20210.1 68417.m02954 terpene synthase/cyclase family protein... 27 9.2
At1g04180.1 68414.m00408 flavin-containing monooxygenase family ... 27 9.2
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = -3
Query: 400 VLEGVYQLLRGADRFVRVAAVHGRVGQHQEQGLAFIVRIYHFNSFVGVDICGVDTEQIVS 221
+LEG + L A R +R A+ +G L V Y + F+G+ C V Q +
Sbjct: 372 MLEGGEEPLYIARRLIRFASED--IGLADPSALTQAVACYQASHFLGMPECNVILAQCTA 429
Query: 220 YLETSPE 200
YL +P+
Sbjct: 430 YLALAPK 436
>At1g78500.1 68414.m09150 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase (04C11)
[gi:6650208] [PMID:11247608]; similar to beta-Amyrin
Synthase GI:3688600 from [Panax ginseng]
Length = 767
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 30 KDLGYKTHLVGKWHLGEATKRNICL*IEGSIVTSVSGLEGSTCTTTRPWSRDRGEPT 200
+D G+ H+ G+ + ICL I G + + ++GS C R W D G T
Sbjct: 162 EDGGWGIHVEGQSAMFCTVINYICLRILG-VEADLDDIKGSGCARARKWILDHGGAT 217
>At5g59190.1 68418.m07418 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]
Length = 693
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -3
Query: 226 VSYLETSPEVGSPRSLLHGRVVVHVDPSSPETDVTIEPSIQRQIFL 89
V++ T VG P S VV P PE ++IEP I R FL
Sbjct: 607 VTFKRTVTNVGFPNSTYKASVV----PLQPELQISIEPEILRFGFL 648
>At2g47430.1 68415.m05920 cytokinin-responsive histidine kinase
(CKI1) identical to GB:D87545
Length = 1122
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 15 TRQYLKDLGYKTHLVGKW-HLGEATKR 92
T +Y+K+LG K +V KW HL A +R
Sbjct: 747 TEKYIKNLGIKVTVVEKWEHLSYALER 773
>At2g28310.2 68415.m03438 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 374
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 WGTDF--RRGFEVAHDLFGVYATDVYTDEAIKVVNSHNKSE 304
WG DF RR E AH+ GV + + I + S KSE
Sbjct: 296 WGLDFALRRCVEPAHEKIGVVDSQWIIHKVIPSLGSQGKSE 336
>At2g28310.1 68415.m03437 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 374
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 188 WGTDF--RRGFEVAHDLFGVYATDVYTDEAIKVVNSHNKSE 304
WG DF RR E AH+ GV + + I + S KSE
Sbjct: 296 WGLDFALRRCVEPAHEKIGVVDSQWIIHKVIPSLGSQGKSE 336
>At4g15340.1 68417.m02346 pentacyclic triterpene synthase (04C11)
identical to pentacyclic triterpene synthase
[gi:6650208] [PMID:11247608]
Length = 766
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 96 ICL*IEGSIVTSVSGLEGSTCTTTRPWSRDRGEPT 200
ICL I G + +GSTCT R W D G T
Sbjct: 184 ICLRIVG-VEAGHDDDQGSTCTKARKWILDHGGAT 217
>At1g21430.1 68414.m02680 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenases YUCCA [gi:16555352],
YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
Arabidopsis thaliana
Length = 391
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 131 RRDYRTLDSKANIPFCSLPEMPFP 60
RR Y L FC LP MPFP
Sbjct: 47 RRSYDRLKLHLAKQFCQLPHMPFP 70
>At2g05990.2 68415.m00652 enoyl-[acyl-carrier protein] reductase
[NADH], chloroplast, putative / NADH-dependent enoyl-ACP
reductase, putative strong similarity to
enoyl-[acyl-carrier protein] reductase [NADH] SP:P80030
from [Brassica napus]
Length = 390
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 246 PQMSTPTKLLKW*ILTIKASPCS*CWPTRPCT 341
P MS+P+K+LK + A+P + W CT
Sbjct: 16 PSMSSPSKILKAGTYIVGANPGNASWDKLSCT 47
>At2g05990.1 68415.m00651 enoyl-[acyl-carrier protein] reductase
[NADH], chloroplast, putative / NADH-dependent enoyl-ACP
reductase, putative strong similarity to
enoyl-[acyl-carrier protein] reductase [NADH] SP:P80030
from [Brassica napus]
Length = 390
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 246 PQMSTPTKLLKW*ILTIKASPCS*CWPTRPCT 341
P MS+P+K+LK + A+P + W CT
Sbjct: 16 PSMSSPSKILKAGTYIVGANPGNASWDKLSCT 47
>At4g28720.1 68417.m04108 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenases YUCCA [gi:16555352],
YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
Arabidopsis thaliana
Length = 426
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Frame = -2
Query: 119 RTLDS-KANIP--FCSLPEMPFP 60
RT D K ++P FC LP+MPFP
Sbjct: 64 RTYDRLKLHLPKQFCQLPKMPFP 86
>At4g20210.1 68417.m02954 terpene synthase/cyclase family protein
(+)-delta-cadinene synthase isozyme XC14,
Gossypiumarboreum, PIR2:S68366
Length = 600
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 394 EGVYQLLRGADRFVRVAAVHGRV 326
EGVY+ L+ +F++ A+ +GR+
Sbjct: 473 EGVYEWLKSRPKFLKAASTYGRL 495
>At1g04180.1 68414.m00408 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenases YUCCA [gi:16555352],
YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
Arabidopsis thaliana; contains Pfam profile PF00743
Length = 421
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Frame = -2
Query: 119 RTLDS-KANIP--FCSLPEMPFP 60
RT D K ++P FC LP+MPFP
Sbjct: 64 RTYDRLKLHLPKKFCQLPKMPFP 86
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,077,879
Number of Sequences: 28952
Number of extensions: 271538
Number of successful extensions: 763
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 868578304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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