Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0422
         (553 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    24   0.89 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   0.89 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   0.89 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   0.89 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.8  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   4.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   6.3  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 386 SLHALARITMKYIYISFFTTVILLYKG 306
           ++  +ARIT    Y  F T   + YKG
Sbjct: 461 TIDVIARITFPVAYFMFLTFFFIHYKG 487


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 386 SLHALARITMKYIYISFFTTVILLYKG 306
           ++  +ARIT    Y  F T   + YKG
Sbjct: 447 TIDVIARITFPVAYFMFLTFFFIHYKG 473


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 386 SLHALARITMKYIYISFFTTVILLYKG 306
           ++  +ARIT    Y  F T   + YKG
Sbjct: 481 TIDVIARITFPVAYFMFLTFFFIHYKG 507


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 386 SLHALARITMKYIYISFFTTVILLYKG 306
           ++  +ARIT    Y  F T   + YKG
Sbjct: 430 TIDVIARITFPVAYFMFLTFFFIHYKG 456


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 265 KKNELPSSCLIISMPLYNNITVVKNDIYIY 354
           K+ E+      I   + N++ +  ND+Y+Y
Sbjct: 351 KQQEITGLIQNIIQEMKNDVLLSNNDVYLY 380


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 265 KKNELPSSCLIISMPLYNNITVVKNDIYIY 354
           K+ E+      I   + N++ +  ND+Y+Y
Sbjct: 389 KQQEITGLIQNIIQEMKNDVLLSNNDVYLY 418


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 36

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 39 PYHVTKLKYHL 71
          PYHV +L +HL
Sbjct: 4  PYHVAQLPHHL 14


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = +1

Query: 265 KKNELPSSCLIISMPLYNNITVVKNDIYIY 354
           K    PS+  ++++ + +   ++K  I+IY
Sbjct: 77  KSLRTPSNMFVVNLAICDFFMMIKTPIFIY 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,531
Number of Sequences: 438
Number of extensions: 3237
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)