Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0419
         (609 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935...    29   2.2  
01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892     29   3.8  
01_01_0283 + 2355183-2355245,2355455-2356045                           27   8.8  

>12_01_0945 +
           9351915-9351929,9352221-9352386,9352903-9353024,
           9353098-9353214,9356997-9357077,9357204-9357272,
           9357727-9357790,9357988-9358067,9358164-9358247,
           9358418-9358502,9359658-9359743,9359924-9360045,
           9360841-9360901,9360981-9361166,9363622-9363723,
           9363803-9363844,9363949-9364086
          Length = 539

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 225 TKLRPRHPLEKSTLTPRAITI 163
           TKL P+HPLE  TLT R + I
Sbjct: 100 TKLIPQHPLEGVTLTERTVRI 120


>01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892
          Length = 309

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -1

Query: 327 DSMQEYFEHTLTYTECRIKTVPKFCLNKIVIYNNTKLRPRHPLEKSTLT 181
           D M  +   TL Y + R + +  +  + +  YN       HP  K +LT
Sbjct: 159 DMMSRFLHTTLPYWDSRARYITTWAQHTLQFYNLAIASKHHPWRKESLT 207


>01_01_0283 + 2355183-2355245,2355455-2356045
          Length = 217

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = +2

Query: 455 TTIKCFIGLSWEKYTKIC---FLVKHEY 529
           TTI C + L WE Y   C     +KHEY
Sbjct: 178 TTIGCGLELGWEGYEGFCSDSCRIKHEY 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,240,845
Number of Sequences: 37544
Number of extensions: 303677
Number of successful extensions: 589
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)