BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0419 (609 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 29 2.2 01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892 29 3.8 01_01_0283 + 2355183-2355245,2355455-2356045 27 8.8 >12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024, 9353098-9353214,9356997-9357077,9357204-9357272, 9357727-9357790,9357988-9358067,9358164-9358247, 9358418-9358502,9359658-9359743,9359924-9360045, 9360841-9360901,9360981-9361166,9363622-9363723, 9363803-9363844,9363949-9364086 Length = 539 Score = 29.5 bits (63), Expect = 2.2 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -1 Query: 225 TKLRPRHPLEKSTLTPRAITI 163 TKL P+HPLE TLT R + I Sbjct: 100 TKLIPQHPLEGVTLTERTVRI 120 >01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892 Length = 309 Score = 28.7 bits (61), Expect = 3.8 Identities = 13/49 (26%), Positives = 21/49 (42%) Frame = -1 Query: 327 DSMQEYFEHTLTYTECRIKTVPKFCLNKIVIYNNTKLRPRHPLEKSTLT 181 D M + TL Y + R + + + + + YN HP K +LT Sbjct: 159 DMMSRFLHTTLPYWDSRARYITTWAQHTLQFYNLAIASKHHPWRKESLT 207 >01_01_0283 + 2355183-2355245,2355455-2356045 Length = 217 Score = 27.5 bits (58), Expect = 8.8 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%) Frame = +2 Query: 455 TTIKCFIGLSWEKYTKIC---FLVKHEY 529 TTI C + L WE Y C +KHEY Sbjct: 178 TTIGCGLELGWEGYEGFCSDSCRIKHEY 205 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,240,845 Number of Sequences: 37544 Number of extensions: 303677 Number of successful extensions: 589 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 583 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 589 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1454766756 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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