Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0419
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026214-2|AAB71314.2|  446|Caenorhabditis elegans Hypothetical ...    31   0.49 
AF016431-1|AAC24248.2|  311|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z81069-3|CAB02989.1|  352|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF016441-8|AAB65913.2|  212|Caenorhabditis elegans Hypothetical ...    27   7.9  

>AF026214-2|AAB71314.2|  446|Caenorhabditis elegans Hypothetical
           protein F52H2.4 protein.
          Length = 446

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -1

Query: 324 SMQEYFEHTLTYTECRIKTVPKFCLNKIVIYNNTKL-RPRHPLEKSTLTPRAITIYNSPL 148
           ++ EYFE    Y +CR  T   FC+ ++++YN+  L  P   +   T  P  ++I  + +
Sbjct: 31  TIYEYFERRFDY-KCRFVTTSLFCV-QMILYNSVALYAPSLAIASITNIPITVSILITAV 88

Query: 147 LCA 139
           L A
Sbjct: 89  LSA 91


>AF016431-1|AAC24248.2|  311|Caenorhabditis elegans Hypothetical
           protein C10B5.1 protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +2

Query: 401 LLRVVVIDNVFFCLFVV*TTIKCFIGLSWEKYTKICFL-VKHEYI 532
           ++R + +D+V FC F++  +   F     ++Y K+C+  +K E I
Sbjct: 94  VIRTIEVDHVGFCNFLILQSQLLFASTDDKRYAKLCWTEIKDESI 138


>Z81069-3|CAB02989.1|  352|Caenorhabditis elegans Hypothetical
           protein F25H9.3 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 216 AVLCYCK*RFCSNKTLARSLSYTLCRSMCVRSIPASNLMLVHCSICLVSL 365
           +V C+C   FC+N TL  S +  L    C + + A       C+ C+ SL
Sbjct: 76  SVQCFCDTDFCNNSTLLLSNATILPIIEC-KDVIAKQYRAAACNKCIWSL 124


>AF016441-8|AAB65913.2|  212|Caenorhabditis elegans Hypothetical
           protein M03F8.6 protein.
          Length = 212

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -1

Query: 591 KREDFSLSTSQCEGKRYDHIIYSCFTKKQIFVYFSQLRPIKHLIVVYTTNKQK 433
           +R +++L +S+ E K Y+HI     ++K   +YF  L   +   +  + N  K
Sbjct: 160 ERINYNLISSKSEVKNYEHISLHKVSRKSDNIYFDDLHIGESSTLAQSNNSTK 212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,449,462
Number of Sequences: 27780
Number of extensions: 320846
Number of successful extensions: 812
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)