Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0419
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.1  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   4.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   4.1  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   9.4  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   9.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.4  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   9.4  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 433 KNIIDYYYA**MLEKHYLLD*FSSDTRQIEQWT 335
           K IIDYY++  M +K Y  D       +IE +T
Sbjct: 423 KRIIDYYHSYKMHQKPYNKDEIIYPNLKIESFT 455


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 433 KNIIDYYYA**MLEKHYLLD*FSSDTRQIEQWT 335
           K IIDYY++  M +K Y  D       +IE +T
Sbjct: 423 KRIIDYYHSYKMHQKPYNKDEIIYPNLKIESFT 455


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +3

Query: 84  LFGTILQICYVIIKKVLRLHTTVGNCKWLS 173
           +F T++   ++ +   +   +   +CKWLS
Sbjct: 6   VFTTLINAAFLCLASTILSESAGTSCKWLS 35


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 301 HIDLHRV*DKDRAKVLFEQNRYLQ 230
           HI LH   D D  K++ E+N  ++
Sbjct: 103 HITLHHCYDADGIKLMNEENGVME 126


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 301 HIDLHRV*DKDRAKVLFEQNRYLQ 230
           HI LH   D D  K++ E+N  ++
Sbjct: 103 HITLHHCYDADGIKLMNEENGVME 126


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -1

Query: 312 YFEHTLTYTECRIKTVPKFCLNKIVIYNNTKLRP 211
           YF HT    E       K  LN+++   NT  RP
Sbjct: 39  YFHHTYIIYESLCGRHEKRLLNELLSSYNTLERP 72


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -1

Query: 312 YFEHTLTYTECRIKTVPKFCLNKIVIYNNTKLRP 211
           YF HT    E       K  LN+++   NT  RP
Sbjct: 39  YFHHTYIIYESLCGRHEKRLLNELLSSYNTLERP 72


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/35 (25%), Positives = 15/35 (42%)
 Frame = +1

Query: 193 FFQGVSRSQFCVIVNNDFVQTKLWHGLYPTLCVGQ 297
           F    +   FC +++N  V  +  H  YP    G+
Sbjct: 563 FLNTAATLSFCEMIHNAQVNKRSIHNNYPVHTFGR 597


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = +3

Query: 252 NKTLARSLSYTLCRSMCVRSIPASNLMLVHCSICLV 359
           NK +  S +  +  +  +RSI  +  +++  ++C V
Sbjct: 195 NKLIEESKTVFILNNEIIRSIQGTGTIILKKTVCFV 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,488
Number of Sequences: 438
Number of extensions: 4056
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)