Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0416
         (547 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003507-1|AAO39511.1|  807|Drosophila melanogaster RE34115p pro...    28   7.2  
AE013599-236|AAM70834.1|  807|Drosophila melanogaster CG15236-PB...    28   7.2  
AE013599-235|AAF57401.2|  807|Drosophila melanogaster CG15236-PA...    28   7.2  
AY881276-1|AAX98708.1|  422|Drosophila melanogaster tolkin protein.    28   9.5  
AF247501-1|AAF63389.1|  582|Drosophila melanogaster PINEAPPLE EY...    28   9.5  

>BT003507-1|AAO39511.1|  807|Drosophila melanogaster RE34115p
           protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 338 YGTVKSAAREHHVQCAHKQHVRYARQK*MSARRQQ 234
           Y   K+   EHH    H+QH+ + +Q+ +  ++QQ
Sbjct: 377 YYDYKTEEHEHHQHQHHQQHLLHEKQRLLQQQQQQ 411


>AE013599-236|AAM70834.1|  807|Drosophila melanogaster CG15236-PB,
           isoform B protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 338 YGTVKSAAREHHVQCAHKQHVRYARQK*MSARRQQ 234
           Y   K+   EHH    H+QH+ + +Q+ +  ++QQ
Sbjct: 377 YYDYKTEEHEHHQHQHHQQHLLHEKQRLLQQQQQQ 411


>AE013599-235|AAF57401.2|  807|Drosophila melanogaster CG15236-PA,
           isoform A protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -3

Query: 338 YGTVKSAAREHHVQCAHKQHVRYARQK*MSARRQQ 234
           Y   K+   EHH    H+QH+ + +Q+ +  ++QQ
Sbjct: 377 YYDYKTEEHEHHQHQHHQQHLLHEKQRLLQQQQQQ 411


>AY881276-1|AAX98708.1|  422|Drosophila melanogaster tolkin protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 386 SRPQIERHRPLRHCQSYGTVKSAAREHHVQCAHKQHVRYARQ 261
           SRP IE H    H Q     +   + HH +  H+Q   + R+
Sbjct: 14  SRPVIEAHHRQSHHQKQAQHRQHHQSHHRKKQHRQQQHHRRR 55


>AF247501-1|AAF63389.1|  582|Drosophila melanogaster PINEAPPLE EYE
           protein.
          Length = 582

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = -2

Query: 492 SP*VAQQDCKRTTPYS*LPA*S----LVAQRHHSPQRVKQQAADRATSPS 355
           +P + QQ    T P+S  P  S    LV+Q   SPQ  +Q  A+   SPS
Sbjct: 434 NPELTQQTALNTIPHSPQPEASFPTQLVSQTFDSPQPQEQAVAEAPNSPS 483


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,573,383
Number of Sequences: 53049
Number of extensions: 394472
Number of successful extensions: 1085
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)