Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0416
         (547 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical p...    31   0.72 
U53335-8|AAA96173.1|  606|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z99281-48|CAE18025.2|  661|Caenorhabditis elegans Hypothetical p...    27   6.7  
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical...    27   6.7  
Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical
           protein ZK180.6 protein.
          Length = 701

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 386 SRPQIERHRPLRHCQSYGTVKSAAREHH 303
           ++PQ+++HRP     S  +  SA+ EHH
Sbjct: 214 AQPQVQQHRPAASSSSSSSSSSASAEHH 241


>U53335-8|AAA96173.1|  606|Caenorhabditis elegans Hypothetical
           protein C55C3.1 protein.
          Length = 606

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 270 IPHVLLMCTLHVMLASRRLHGAIRLAVTQRAMS 368
           +PHVL +   H+ + SRR+H  + + V +R +S
Sbjct: 519 LPHVLRIKDSHINVLSRRMHIQVDVDVDERRLS 551


>Z99281-48|CAE18025.2|  661|Caenorhabditis elegans Hypothetical
           protein Y57G11C.42 protein.
          Length = 661

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 375 LRPAASLV--GDYDAFGPLSSTQGVTSKE*FVCSP 473
           +RP  SLV  GDYD   P S    V S + FV SP
Sbjct: 204 IRPPESLVVIGDYDEDEPPSENAVVDSPQPFVTSP 238


>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
            protein Y59A8B.1a protein.
          Length = 1641

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 293  HTARDAREPPTSRCHTTGSDA 355
            H A D  EPP S+CH    DA
Sbjct: 1542 HLAMDLYEPPVSQCHRWVDDA 1562


>Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical
           protein F33A8.4 protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +1

Query: 43  HCSRAATCTRRRYFWRANCAYCSRAAGC 126
           HC +   C + RY   A CA C     C
Sbjct: 434 HCEKCDKCVKPRYVHCAQCARCHLYGRC 461


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,441,443
Number of Sequences: 27780
Number of extensions: 180039
Number of successful extensions: 558
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)