Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0415
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17826 Cluster: Putative uncharacterized protein; n=3; ...    35   1.4  
UniRef50_A0CUF3 Cluster: Chromosome undetermined scaffold_28, wh...    35   1.8  
UniRef50_Q38EJ4 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_A0BVT4 Cluster: Chromosome undetermined scaffold_130, w...    33   4.1  
UniRef50_Q5NP17 Cluster: Two-component response regulator; n=1; ...    33   5.5  
UniRef50_Q7RGV7 Cluster: Putative uncharacterized protein PY0423...    33   7.2  

>UniRef50_Q17826 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 540

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 130 RAHVTYFVKYVFSYTCTSEAYLHPFYNNFSNFQLLINLVP 11
           RA VT  V  +F+Y C   A  H F N F ++ L++++ P
Sbjct: 64  RAAVTTSVGLIFTYFCYGNAIAHLFINGFGSYLLMVSVPP 103


>UniRef50_A0CUF3 Cluster: Chromosome undetermined scaffold_28, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_28,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 189

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 21/68 (30%), Positives = 34/68 (50%)
 Frame = -2

Query: 527 FCVTVRAHRNISLSSIFHNAPKEVLLQKLQYKKN*CLYGS*KGIYIISLQNNVHKRNRFT 348
           F   V+  R I  +++FHN P+ V +++L+ +K   L       ++I L NNV K N   
Sbjct: 71  FANQVKLVRIIHENTMFHNKPELVAIERLKKEKQFKLLNQNDQSFLIDLLNNVIKNNNDQ 130

Query: 347 HTNMYRLL 324
           +   Y  L
Sbjct: 131 NRQRYPTL 138


>UniRef50_Q38EJ4 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 194

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 255 CKVCMYMFIYFTGLMFFLQGKVP 323
           C++CMY+FIY   L FFL+ K P
Sbjct: 151 CRLCMYLFIYNFFLFFFLKKKSP 173


>UniRef50_A0BVT4 Cluster: Chromosome undetermined scaffold_130,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_130,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 511

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 22/72 (30%), Positives = 38/72 (52%)
 Frame = +3

Query: 189 FHSSHNSKFKKDSKIQPVIF*ICKVCMYMFIYFTGLMFFLQGKVPEKSVHVRVSETISFM 368
           + SS+N K K D +I+P    +    +   + F GLM  L  K+ +K V+ ++ E + F+
Sbjct: 392 YESSYNIKIKCDYRIEPDYTIVTNQQILNKLLF-GLMQILV-KLNQKDVNFKLQEELGFL 449

Query: 369 DIVLKRYYVDTF 404
           DI +    + TF
Sbjct: 450 DIFISLNQLTTF 461


>UniRef50_Q5NP17 Cluster: Two-component response regulator; n=1;
           Zymomonas mobilis|Rep: Two-component response regulator
           - Zymomonas mobilis
          Length = 585

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 503 RNISLSSI-FHNAPKEVLLQKLQYKKN*CLYGS*KGIYIISLQNNVHKRNRFTHTN 339
           RN+ +S     + P+ +++  L YK N    G+ +G+YI  ++N   K    THTN
Sbjct: 31  RNLEVSPYSVPDLPENLIVTNLLYKNNILYIGTPEGLYIYDIKNK--KTEHLTHTN 84


>UniRef50_Q7RGV7 Cluster: Putative uncharacterized protein PY04239;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04239 - Plasmodium yoelii yoelii
          Length = 1192

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 305 KKHKSCKIYEHVHTYFTYLKYNWL-NFRIFFKFRIMT*MKI*IFLIHTGCYFN 150
           K  + C     +  Y+TYLKYN++ N +I++K    T  KI +   +T   FN
Sbjct: 152 KNDQICSTTNIIDQYYTYLKYNYIYNNKIYYKITNYT-NKINLLYFYTKMKFN 203


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,613,206
Number of Sequences: 1657284
Number of extensions: 10389389
Number of successful extensions: 23241
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23235
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)