Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0414
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    33   0.19 
AL032636-1|CAA21605.1|  343|Caenorhabditis elegans Hypothetical ...    28   4.0  
Z54342-5|CAA91147.1|  457|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U41993-6|AAA83448.2|  313|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AC024202-4|AAF36036.1|  406|Caenorhabditis elegans Hypothetical ...    27   7.0  

>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = -2

Query: 558  FDNASIKSVLDTHGIAQRLVTPYTPEQNGVSVTEIARSMMYAHEPLPQVLWAELINTAAY 379
            FD A  +  ++T GI   L+ P   +   +S  +     +   EPLPQ L    +     
Sbjct: 2331 FDPADFEKSIETEGITHCLLFPSLVQSFNISKIKNLAYWVVGGEPLPQSLLDSALALGIK 2390

Query: 378  ILNRTGPTSS 349
            ++   GPT +
Sbjct: 2391 VIQNYGPTET 2400


>AL032636-1|CAA21605.1|  343|Caenorhabditis elegans Hypothetical
           protein Y40B1B.3 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 278 IEPIIRRCLIIGFFPYQSSCGDLSELVGPVLFSMYAAVLMSSAHS 412
           IE + +    +GF     SC D SE++ PVL + Y      S+H+
Sbjct: 63  IEAVFKDGNTVGFEISTESCADCSEVMYPVLGTYYEDGSYDSSHA 107


>Z54342-5|CAA91147.1|  457|Caenorhabditis elegans Hypothetical
           protein C08H9.10 protein.
          Length = 457

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -3

Query: 209 SGTTKIATVSGSQTENTRRSSALVT*SSMRNLFLSVIVKFLK 84
           + T K+    G Q+ N+R  S LV+  + RN+F++ IV F++
Sbjct: 169 NSTLKVMISIGGQS-NSRSFSRLVSNETSRNVFVNSIVSFVQ 209


>U41993-6|AAA83448.2|  313|Caenorhabditis elegans Hypothetical
           protein F44A2.7 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 446 DLAISVTLTPFCSGVYGVTSRCAIPCVSKTLFMD 547
           +LAI   LTPFC GV+     C      K +  D
Sbjct: 265 NLAIPFVLTPFCDGVFVTKEFCRSQFTQKIIKTD 298


>AC024202-4|AAF36036.1|  406|Caenorhabditis elegans Hypothetical
           protein Y71H2B.7 protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 307 NRFLSIPKFMRRFI*TCGTCSVQYV 381
           +  + IP+FMR+F+ T G C + YV
Sbjct: 234 SELVKIPQFMRQFLTTDGHCFLLYV 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,459,406
Number of Sequences: 27780
Number of extensions: 292204
Number of successful extensions: 790
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)