Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0412
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5DHN4 Cluster: Putative uncharacterized protein; n=1; ...    35   0.88 
UniRef50_A6PF65 Cluster: Putative uncharacterized protein precur...    33   3.6  
UniRef50_O96204 Cluster: Putative uncharacterized protein PFB055...    32   8.2  
UniRef50_Q4J762 Cluster: Conserved membrane protein; n=3; Sulfol...    32   8.2  

>UniRef50_A5DHN4 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 251

 Score = 35.1 bits (77), Expect = 0.88
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +1

Query: 283 FFYDPYHLSRKRFTTIIWFVFHVHIYMFPDTSVLVKSICLFIISQNFLKINSS 441
           FF+ P   SRK   ++    FH  IY   DTS+ +  I L ++++N  K+ S+
Sbjct: 136 FFFFPRLCSRKGSKSLTNLCFHRSIYFLVDTSMPISFISLELVAKNLSKLPSN 188


>UniRef50_A6PF65 Cluster: Putative uncharacterized protein
           precursor; n=1; Shewanella sediminis HAW-EB3|Rep:
           Putative uncharacterized protein precursor - Shewanella
           sediminis HAW-EB3
          Length = 242

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 5   IIYLDTKPYLFYPSFNPITGIYAIVKQLC 91
           ++YL  K  LFY S+N +TGI   +  LC
Sbjct: 138 LVYLSMKGRLFYSSWNAVTGILTFISFLC 166


>UniRef50_O96204 Cluster: Putative uncharacterized protein PFB0555c;
            n=4; Plasmodium|Rep: Putative uncharacterized protein
            PFB0555c - Plasmodium falciparum (isolate 3D7)
          Length = 4091

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 188  YSHFAVMYFNIIHNRPMFLQLFF*IIVIHSHGYK 87
            Y   ++ Y N ++N P+FL LF   + IH H +K
Sbjct: 3066 YLKKSIKYNNHLYNMPIFLSLFLRCVTIHLHYFK 3099


>UniRef50_Q4J762 Cluster: Conserved membrane protein; n=3;
           Sulfolobus|Rep: Conserved membrane protein - Sulfolobus
           acidocaldarius
          Length = 378

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 494 ILFSFVFVYMAFVFLIPLLEFIFKKFCEIMNRHIDFTKTEVSGNMY 357
           ILFS + + +A+V  +PL   +F  F    N   + + T + G+MY
Sbjct: 75  ILFSSIALLLAYVLNMPLYVMVFILFQSFFNTVYNVSSTAIVGDMY 120


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,450,807
Number of Sequences: 1657284
Number of extensions: 8460318
Number of successful extensions: 18515
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18506
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)