Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0412
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024788-4|ABE73331.1|  305|Caenorhabditis elegans Hypothetical ...    29   1.4  
AF098993-7|ABN43095.1|  525|Caenorhabditis elegans Hypothetical ...    29   1.9  
AF098993-6|AAC67469.2|  562|Caenorhabditis elegans Hypothetical ...    29   1.9  
AF002197-1|AAB53982.1|  383|Caenorhabditis elegans Hypothetical ...    28   3.3  
AB275893-1|BAF34316.1|  383|Caenorhabditis elegans hypothetical ...    28   3.3  
Z75712-2|CAB00041.1|  254|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AL132952-11|CAB61148.1|  136|Caenorhabditis elegans Hypothetical...    27   7.6  
U41272-2|AAA82447.1|  143|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AF014939-1|AAB63926.1|  578|Caenorhabditis elegans Hypothetical ...    27   10.0 

>AC024788-4|ABE73331.1|  305|Caenorhabditis elegans Hypothetical
           protein Y46E12A.4 protein.
          Length = 305

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 452 LIPLLEFIFKKFCEIMNRHIDFTKTEVS 369
           L P+LEF FK  CE +N  I  T   +S
Sbjct: 32  LFPILEFAFKGLCEHLNYKIGVTMEPIS 59


>AF098993-7|ABN43095.1|  525|Caenorhabditis elegans Hypothetical
           protein T10B11.7b protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
 Frame = +3

Query: 294 SLSFIEKTLHHNYLVRISRSYIHVP*HFCF------SEINMSIHYF 413
           SL  I++  HH + V  S SY  V  HFC        E+N S++ F
Sbjct: 125 SLLPIQRPSHHTFCVFCSESYPPVEFHFCIFMTAAQKEVNQSVNEF 170


>AF098993-6|AAC67469.2|  562|Caenorhabditis elegans Hypothetical
           protein T10B11.7a protein.
          Length = 562

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
 Frame = +3

Query: 294 SLSFIEKTLHHNYLVRISRSYIHVP*HFCF------SEINMSIHYF 413
           SL  I++  HH + V  S SY  V  HFC        E+N S++ F
Sbjct: 162 SLLPIQRPSHHTFCVFCSESYPPVEFHFCIFMTAAQKEVNQSVNEF 207


>AF002197-1|AAB53982.1|  383|Caenorhabditis elegans Hypothetical
           protein F20H11.5 protein.
          Length = 383

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 221 LAGENILCDSKAESKCSNESRFFTILIIYRENASPQLFG 337
           L   +IL DSK +     ES + +++  YR+ A P+LFG
Sbjct: 105 LVSGHILSDSKTKLDSQRES-YGSLVYNYRDLAEPELFG 142


>AB275893-1|BAF34316.1|  383|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 383

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 221 LAGENILCDSKAESKCSNESRFFTILIIYRENASPQLFG 337
           L   +IL DSK +     ES + +++  YR+ A P+LFG
Sbjct: 105 LVSGHILSDSKTKLDSQRES-YGSLVYNYRDLAEPELFG 142


>Z75712-2|CAB00041.1|  254|Caenorhabditis elegans Hypothetical
           protein K04G2.4 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 18/82 (21%), Positives = 34/82 (41%)
 Frame = +3

Query: 246 TQKQNRNAVMNHVFLRSLSFIEKTLHHNYLVRISRSYIHVP*HFCFSEINMSIHYFTKLF 425
           +  +N+N+      L+    +E+++HHN +     +          SE     HY   L 
Sbjct: 4   SHSKNKNSKSKSAILKKEHPLERSIHHNRVAHFDETQPTSQSTSVESEELNVKHYSKTLL 63

Query: 426 ENKFK*GYQKNKSHVYEYKTKQ 491
            +  +  +QK  +HV E   K+
Sbjct: 64  NDTVEPTHQKTSAHVPEKSIKK 85


>AL132952-11|CAB61148.1|  136|Caenorhabditis elegans Hypothetical
           protein Y51H4A.16 protein.
          Length = 136

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 154 IMLKYITAKWLYRHSYS*NVLVFSG 228
           I+L YI  + +Y+HS   NVL+F G
Sbjct: 109 ILLYYILIRVIYKHSNLENVLMFHG 133


>U41272-2|AAA82447.1|  143|Caenorhabditis elegans Hypothetical
           protein T03G11.5 protein.
          Length = 143

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 269 SNESRFFTILIIYRENASPQLFGSYFTFIYTCSLTLLF**NQYVYSLFHK 418
           +  S F  I +      S  L  SY     +CSL + F    ++Y LF++
Sbjct: 94  ATSSTFNNITLPENSKESQLLVNSYPHVFQSCSLIIFFVTKMFIYKLFYQ 143


>AF014939-1|AAB63926.1|  578|Caenorhabditis elegans Hypothetical
           protein ZC132.3a protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 458 VFLIPLLEFIFKKFCEIMNRHIDFTKTEVS 369
           +FL+P +  IF+ FC    +H++F + E++
Sbjct: 547 LFLVPSMVLIFEVFCR--PKHVEFQEVEMT 574


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,073,253
Number of Sequences: 27780
Number of extensions: 223591
Number of successful extensions: 495
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)