Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0412
         (499 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g75120.1 68414.m08724 expressed protein                             27   9.3  
At1g69700.1 68414.m08021 ABA-responsive protein (HVA22c) identic...    27   9.3  

>At1g75120.1 68414.m08724 expressed protein 
          Length = 402

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = +2

Query: 29  YLFYPSFNPITGIYAIVKQLCIHDYVLL*SKKIIAKTL 142
           +LFYPS    TG+YA  + + +++++   + +++ KT+
Sbjct: 320 HLFYPSHPGYTGLYASKRVMDVYEFM---NSRVLFKTV 354


>At1g69700.1 68414.m08021 ABA-responsive protein (HVA22c) identical
           to AtHVA22c [Arabidopsis thaliana] GI:4884936
          Length = 184

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 286 FYDPYHLSRKRFTTIIWFVFHVHIYMFP 369
           F  P++   +R TT IW+V H     FP
Sbjct: 103 FIRPFYRDPQRATTKIWYVPHKKFNFFP 130


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,911,792
Number of Sequences: 28952
Number of extensions: 184376
Number of successful extensions: 320
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)