Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0410
(606 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 252 2e-67
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 217 4e-57
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 141 3e-34
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 141 3e-34
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 132 2e-31
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 3e-27
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 118 4e-27
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 5e-24
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 105 4e-23
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 103 8e-23
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 103 1e-22
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 93 1e-19
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 91 6e-19
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 89 2e-18
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 78 6e-15
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 74 1e-13
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 69 3e-12
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 68 7e-12
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 64 6e-11
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 59 2e-09
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 47 1e-05
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 41 7e-04
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 39 0.003
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 38 0.006
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 35 0.059
SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07) 33 0.24
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 30 1.7
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 29 3.9
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 28 5.1
SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0) 28 5.1
SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_26279| Best HMM Match : S-antigen (HMM E-Value=3) 28 6.7
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 6.7
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 27 8.9
SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24) 27 8.9
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 252 bits (616), Expect = 2e-67
Identities = 132/195 (67%), Positives = 149/195 (76%), Gaps = 28/195 (14%)
Frame = +2
Query: 104 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ------------ 247
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQL 111
Query: 248 ----------GRDVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILAPTREL 379
RDVIAQAQSGTGKTATF+ISILQ+IDT+ ++ CQAL+LAPTREL
Sbjct: 112 NLTKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTREL 171
Query: 380 AQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHA 559
AQQIQKVV+ALGD+++ KCHACIGGTNVRED +LE GVHVVVGTPGRV+DMI R L+
Sbjct: 172 AQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLNT 231
Query: 560 NTIKLFVLDEADEML 604
IKLFVLDEADEML
Sbjct: 232 RDIKLFVLDEADEML 246
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 217 bits (531), Expect = 4e-57
Identities = 102/137 (74%), Positives = 120/137 (87%)
Frame = +2
Query: 194 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 373
GFEKPSAIQQRAI P ++GRDVIAQAQSGTGKTATFSIS+LQ IDT +RE QAL+L+PTR
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTR 75
Query: 374 ELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 553
ELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G H+V GTPGRV+DMI RR L
Sbjct: 76 ELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRRRNL 135
Query: 554 HANTIKLFVLDEADEML 604
+IK+ VLDEADEML
Sbjct: 136 RTRSIKMLVLDEADEML 152
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 141 bits (342), Expect = 3e-34
Identities = 69/161 (42%), Positives = 108/161 (67%), Gaps = 7/161 (4%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 322
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 323 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG--- 493
DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT++++DI +L +
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIF 168
Query: 494 ----VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
VHV+V TPGRV D++ ++ + ++ V+DEAD++L
Sbjct: 169 VHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLL 209
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 141 bits (342), Expect = 3e-34
Identities = 69/161 (42%), Positives = 108/161 (67%), Gaps = 7/161 (4%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 322
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 323 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG--- 493
DT+ QAL+L PTRELA Q ++ I LG H+ A+ GGT++++DI +L +
Sbjct: 109 TDTTKNCIQALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIF 168
Query: 494 ----VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
VHV+V TPGRV D++ ++ + ++ V+DEAD++L
Sbjct: 169 VHVVVHVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLL 209
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 132 bits (320), Expect = 2e-31
Identities = 70/155 (45%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 322
F + L LLRG+ GFEKPS IQ +AI G D+IAQA+SGTGKT FS+ L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 323 IDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVREDIRQLESGVH 499
+ T Q +IL PTRE+A Q++ V+ A+G H + C IGG ++ ED + L+S H
Sbjct: 75 VITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKS-CH 133
Query: 500 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
+ VGTPGRV +I ++ L ++++F+LDEAD++L
Sbjct: 134 IAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLL 168
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 118 bits (285), Expect = 3e-27
Identities = 61/162 (37%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 313
+ +F+++ E+L+ I G+ +P+ +Q+ A+ + GRD++A AQ+G+GKTA + + +
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPV 537
Query: 314 L-----QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 478
L Q ++ R AL +APTRELA+QI DH K C GG +V
Sbjct: 538 LTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQAS 597
Query: 479 QLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
QLE G H +VGTPGR+ D ++R ++ +I+ +LDEAD ML
Sbjct: 598 QLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRML 639
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 118 bits (284), Expect = 4e-27
Identities = 65/156 (41%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 322
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 323 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 496
++ + L++ TRELA QI K ++ N K GG N+++D + L++
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 497 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
H+VVGTPGR+ + + L+ K F+LDE D+ML
Sbjct: 169 HIVVGTPGRILALTREKTLNLKHAKHFILDECDKML 204
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 118 bits (284), Expect = 4e-27
Identities = 65/156 (41%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 322
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 323 IDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLESGV- 496
++ + L++ TRELA QI K ++ N K GG N+++D + L++
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCP 168
Query: 497 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
H+VVGTPGR+ + + L+ K F+LDE D+ML
Sbjct: 169 HIVVGTPGRILALTREKTLNLKHAKHFILDECDKML 204
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 107 bits (258), Expect = 5e-24
Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 9/166 (5%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 313
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKTA F + +
Sbjct: 710 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPV 769
Query: 314 LQQI------DTSIRECQ---ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 466
+ + +S E Q A+ +APTRELA QI + C GG +V
Sbjct: 770 MTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVS 829
Query: 467 EDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
+RQL+SG +++VGTPGR+ D I + + ++ +LDEAD ML
Sbjct: 830 HQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRML 875
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 105 bits (251), Expect = 4e-23
Identities = 45/65 (69%), Positives = 58/65 (89%)
Frame = +2
Query: 335 IRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGT 514
+RE QAL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+L+ G H+V GT
Sbjct: 1 LREPQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGT 60
Query: 515 PGRVY 529
PGRV+
Sbjct: 61 PGRVF 65
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 103 bits (248), Expect = 8e-23
Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 4/160 (2%)
Frame = +2
Query: 137 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDV--IAQAQSGTGKTATFSIS 310
++F+++ L L RG+Y GF KPS IQ+ A+ + V IAQ+QSGTGKTA F ++
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLT 162
Query: 311 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQLE 487
+L ++D + Q + L+PT ELA+Q KV A+G H + K + + G R +
Sbjct: 163 MLSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFP---RGQK 219
Query: 488 SGVHVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML 604
H+++GTPG + D I + + + +FVLDEAD M+
Sbjct: 220 CTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMI 259
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 103 bits (247), Expect = 1e-22
Identities = 59/156 (37%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 319
+F + L + L+ A G +KP+ IQ + P +QGRD I A++G+GKTA F++ ILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 320 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 499
++ A++L PTRELA QI LG + K +GG ++ + L + H
Sbjct: 68 KLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPH 127
Query: 500 VVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEML 604
VV+ TPGR+ D I + L+ I+ VLDEAD +L
Sbjct: 128 VVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLL 163
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 93.5 bits (222), Expect = 1e-19
Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Frame = +2
Query: 140 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS----I 307
+F E+++ I + +P+ IQ +A+ + GRD+I A++G+GKTA F +
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 577
Query: 308 SILQQIDTSIRECQ-ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 484
I+ Q + + + LI APTREL QQI G N A GG N E + L
Sbjct: 578 HIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKAL 637
Query: 485 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM 601
+ G +VV TPGR+ D + +A + + + V DEAD M
Sbjct: 638 QEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRM 676
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 93.5 bits (222), Expect = 1e-19
Identities = 55/162 (33%), Positives = 93/162 (57%), Gaps = 5/162 (3%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 313
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++G+GKT F I I
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 314 LQ----QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 481
++ Q TS+ AL+++PTRELA Q +V++ +G+ + IGG +++ + ++
Sbjct: 109 IETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKR 168
Query: 482 LESGVHVVVGTPGRVYD-MITRRALHANTIKLFVLDEADEML 604
+ ++VV TPGR+ M ++++ VLDEAD +L
Sbjct: 169 IMK-TNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRIL 209
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 91.1 bits (216), Expect = 6e-19
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = +2
Query: 251 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 430
+DVI A++G+GKT F++ ILQ + + + ALIL PTRELA QI + ALG +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGSGIGV 61
Query: 431 KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEML 604
KC +GG ++ L H+++ TPGR+ D + + T+K V+DEAD +L
Sbjct: 62 KCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEADRIL 120
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 89.4 bits (212), Expect = 2e-18
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Frame = +2
Query: 23 SEDWPEDSKNG--PSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYG 196
+E+ PE SK +KD+ +D G++P + D F + ++ + + G
Sbjct: 40 AEEQPEVSKKKRKTAKDESEFD--EGVEPSVAQREGD-----FSKFRISQKTIDNLEDRG 92
Query: 197 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSI-----RECQALI 358
IQ G DVI QA++GTGKT +F++ +++++ D + R + L+
Sbjct: 93 ITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLV 152
Query: 359 LAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 538
+APTRELA+Q+ L +L C GG + SG+ V+VGTPGR+ D +
Sbjct: 153 MAPTRELAKQVGNEFENLKSNLEVYC--IYGGMPYEPQENAINSGLDVLVGTPGRILDFM 210
Query: 539 TRRALHANTIKLFVLDEADEML 604
+ L + +K VLDE D ML
Sbjct: 211 RQGTLDLSKLKHVVLDEVDRML 232
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 89.4 bits (212), Expect = 2e-18
Identities = 52/156 (33%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Frame = +2
Query: 155 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQI 325
++ E+ L+GI GF + IQ ++I P ++GRD++ A++G+GKT F + +L ++
Sbjct: 578 DVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKL 637
Query: 326 DTSIRE-CQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHV 502
R +I++PTREL+ Q V L H N +GG N + + +L+ GV++
Sbjct: 638 QFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNL 697
Query: 503 VVGTPGRVYDMI--TRRALHANTIKLFVLDEADEML 604
++ TPGR+ D + T+ L+ N ++ V+DEAD +L
Sbjct: 698 LIATPGRLLDHLQNTQGFLYKN-LQCLVIDEADRIL 732
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 79.0 bits (186), Expect = 3e-15
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 20/162 (12%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISILQ 319
++ + + ++LR + GF KP+ IQ +I P + RD+I A++G+GKT F I I+Q
Sbjct: 132 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQ 191
Query: 320 QIDT--------------SIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNAKCHA 442
I+ S E Q ALI+APTRELA Q++ ++ + + K A
Sbjct: 192 HIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAA 251
Query: 443 CIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTI 568
+GG + R L+ +VV TPGR++++I++ H +
Sbjct: 252 IVGGMAAPKQQRLLKQRPEIVVATPGRLWELISQVFTHGKPL 293
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 77.8 bits (183), Expect = 6e-15
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +2
Query: 353 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYD 532
L+L PTRELAQQ+Q+V ++G H + GG IR+LE GV + + TPGR+ D
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLID 195
Query: 533 MITRRALHANTIKLFVLDEADEML 604
M+ R + VLDEAD ML
Sbjct: 196 MLESRKTNLRRCTYLVLDEADRML 219
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +2
Query: 422 LNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRAL 553
++ KCHACIGGTNVRED +LE GVHVVVGTPGRV+DMI R L
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVL 44
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 73.7 bits (173), Expect = 1e-13
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Frame = +2
Query: 92 GMDPG-TLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVI 262
G +P T D+D + Q V +F + L++++L+ + A +P+ IQ I I VI
Sbjct: 360 GQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVI 419
Query: 263 AQAQSGTGKTATFSISILQQIDTS---------IRECQALILAPTRELAQQIQKVVIALG 415
AQ+G+GKT + ++ ++ ++ +A I+ P RELA QI K +L
Sbjct: 420 CAAQTGSGKTLAYLAPLVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLC 479
Query: 416 DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEAD 595
H + IGG + LES V ++V TPG + + L + + V+DEAD
Sbjct: 480 HHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEAD 539
Query: 596 EM 601
M
Sbjct: 540 TM 541
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 72.1 bits (169), Expect = 3e-13
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 319
F+D++L E LL + G++KP+ +Q+ AI P ++G RD++A AQ+G+GKT
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKRDLMACAQTGSGKT--------- 926
Query: 320 QIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNAKCHACI--GGTNVREDIRQLES 490
A L P L++ + A D + C C+ GG ++ +R+L+
Sbjct: 927 ----------AAFLIPI--LSRIYMEGPPAPPDFSYRSLCRPCVVYGGADIGSQLRELDR 974
Query: 491 GVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
H++V TPGR+ DM+ R + ++I+ VLDEAD ML
Sbjct: 975 NCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRML 1012
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 69.7 bits (163), Expect = 2e-12
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Frame = +2
Query: 242 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALG 415
+ G+DV+A A++G+GKTA F I + +++ T + +ALIL+PTRELA Q QK + LG
Sbjct: 316 MDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFIKELG 375
Query: 416 DHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEAD 595
K +GG + VV TPGR ++ L ++++ V DEAD
Sbjct: 376 RFTGLKSSVILGGDS--------------VVATPGRFLHVVMEMELKLSSVEYVVFDEAD 421
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 68.9 bits (161), Expect = 3e-12
Identities = 39/118 (33%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 313
+ + + + + +L + G++ P+ IQ++AI +Q RD+I A++G+GKTA F+I +
Sbjct: 100 IRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPL 159
Query: 314 L---------QQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 460
L ++ + + + ALILAPTRELAQQI++ ++ G L + + IGG +
Sbjct: 160 LVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGAD 217
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 67.7 bits (158), Expect = 7e-12
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 27/189 (14%)
Frame = +2
Query: 119 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 298
D + +E+F D+NL EL + F+ P+ IQ +++ + GRD+I A++G+GKT
Sbjct: 66 DCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLA 125
Query: 299 FSISILQQIDTSIRECQ-----ALILAPTRELAQQIQKVVIALGDHLNA----------- 430
+S+ + + T ALIL PTREL QQ+ V + D +
Sbjct: 126 YSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSV 185
Query: 431 -----------KCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDMITRRALHANTIKLF 577
K A GG V L G VVV TPGR+ D+ I
Sbjct: 186 IYDTQQFTARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLDLY--------KITYL 237
Query: 578 VLDEADEML 604
V+DE D ML
Sbjct: 238 VMDEPDRML 246
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +2
Query: 338 RECQALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTP 517
R+ A+++ PTRELA QI + N +C GGT + E I +L+ G ++V TP
Sbjct: 143 RDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTP 202
Query: 518 GRVYDMITR---RALHANTIKLFVLDEADEM 601
GR+ DM+T R + VLDEAD M
Sbjct: 203 GRMIDMLTANNGRVTNCQRCTYLVLDEADRM 233
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 64.5 bits (150), Expect = 6e-11
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 322
F + + +L+ + G KP IQ++A+ + ++ ++++GTGK+ F +L
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVF---LLPS 218
Query: 323 IDTSIRECQALILAPTRELA-QQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVH 499
+ R +I+ PTRELA Q + +V LGD + + + G ++ + L+ +H
Sbjct: 219 VQDPGRGYGTIIVVPTRELASQMLYEVSRLLGD--KSIVASFVSGVDLSRQEKLLKDSLH 276
Query: 500 ---VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
+V+GTP R+++++ K V+DE D+ L
Sbjct: 277 PPRIVIGTPKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +2
Query: 125 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 304
D+V+ +D ++ + E R + GF P+ IQ I + G+DV A A +GTGKTA F
Sbjct: 7 DEVLNAYDSLDEEAED-RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFM 65
Query: 305 ISILQQI---DTSIRECQALILAPTRELAQQ 388
+ IL+++ T + L++ PTRELA Q
Sbjct: 66 LPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 134 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 292
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKT
Sbjct: 133 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 494 VHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
V +V GTPG++ D IT + + +K F+LDEAD +L
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLL 172
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 485 ESGVHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 604
E GV V+V TPGR+ ++I+R+A+ + V+DE D ML
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTML 292
Score = 35.5 bits (78), Expect = 0.034
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 289
F + E L + + +G+ P+ IQ + + + GRDV+ A +G+GK
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +2
Query: 347 QALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG--VHVVVGTPG 520
+A++++PTRELAQQI + L + H + N + +S ++V TP
Sbjct: 207 RAVVVSPTRELAQQIYREFCHLAKGCAFRIHV-LTKANASTNTFGAKSSKRFDILVTTPN 265
Query: 521 RVYDMITRR--ALHANTIKLFVLDEADEM 601
R+ ++T+ + + ++ +LDEAD++
Sbjct: 266 RLVHLLTQEPPGIELHNVEWLILDEADKL 294
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 34.7 bits (76), Expect = 0.059
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Frame = +2
Query: 194 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRE-------CQ 349
G P+++Q+ ++GRDV A G+GK + + I+ QI ++S+ +
Sbjct: 206 GVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITESSVYQELPLANGPL 265
Query: 350 ALILAPTRELAQQIQKVVIAL-GDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRV 526
LIL + ++ V L + + GG + I L +G V+V TP
Sbjct: 266 VLILCTNWQNTARVYGVCEDLIRNRRRTRVQMIFGGGAEEDRIVPLINGCEVLVATPPCF 325
Query: 527 YDMITRRALHANTIKLFVLDEAD 595
M+ R + + V D+AD
Sbjct: 326 LRMLKRCYTSLDRLCHVVFDDAD 348
>SB_2863| Best HMM Match : Asp (HMM E-Value=1.2e-07)
Length = 721
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -2
Query: 557 HEAHDELSYHIHDLECPP---PHEHHSPVGEYLHGHWC 453
HE ++Y H+ CP PHEH P+ H H C
Sbjct: 657 HENMGPMNYLSHEHMCPMNNVPHEHMGPINNVSHEHMC 694
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 32.7 bits (71), Expect = 0.24
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 14 ERRSEDWPEDSKNGPSKDQGSYD---GPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGI 184
E+ +E+ E +K + D+G GPPG GT D VVE DD K E G
Sbjct: 19 EKTAEEMRELAKKAEACDRGVRAILLGPPGSGKGTQLVSDDLVVELIDDNLTKPECQNGW 78
Query: 185 YAYGFEKPSA 214
GF + A
Sbjct: 79 LLDGFPRTVA 88
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 143 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQS 277
++ + + ++LR + GF KP+ IQ +I P + RD+I A++
Sbjct: 74 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +2
Query: 56 PSKDQGSYDGPPGMDPGTLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 229
PS + G+ + D L D + V + M+LK ++ + +KP + A
Sbjct: 1228 PSDEVGTLESTQMCDKIYLSQDVKHESVEQMTPSMSLKPDVQT--LSIPSDKPPKVSSSA 1285
Query: 230 IMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQ 349
P + G D +I Q+ GKT SI QQ+DT RE Q
Sbjct: 1286 --PSLMGTDEIICQSLEHAGKTPPALSSISQQLDTR-REIQ 1323
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 200 EKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQ 349
+KP + A P + G D +I Q++ GKT SI QQ+DT RE Q
Sbjct: 1567 DKPPKVSFSA--PSLMGTDEIICQSREHAGKTPPALSSIPQQLDTG-REIQ 1614
Score = 27.9 bits (59), Expect = 6.7
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +2
Query: 56 PSKDQGSYDGPPGMDPGTLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 229
PS + G+ + D L D + V + M+LK ++ + +KP + A
Sbjct: 1810 PSDEVGTLESTQKFDEIDLSQDVKHESVEQMTPSMSLKPDVQT--LSIPSDKPPKVSFSA 1867
Query: 230 IMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDT--SIRE 343
P + G D +I Q+ GKT S QQ+DT IRE
Sbjct: 1868 --PSLMGTDEIICQSLEHAGKTPPALSSFSQQLDTRREIRE 1906
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 473 IRQLESGVHVVVGTPGRVYDMIT 541
I +L+ G ++V TPGR+ DM+T
Sbjct: 1 IAELKRGAEIIVCTPGRMIDMLT 23
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 53 GPSKDQG-SYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRG 181
GP +QG S GPPG PG T W+ + N E LRG
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESLRG 3405
>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 320 QIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKCHACI 448
Q D++++E IL ELA++IQK++ LN K AC+
Sbjct: 58 QGDSTLKEPVQKILIIGLELAKEIQKLIDEASSGLNIKHAACL 100
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 242 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 343
+ G DV+A + SGT K + F ++++ D+ R+
Sbjct: 245 VNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +2
Query: 167 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC 346
E+ + + GF A Q++A+M + G + +G GK+ + + S C
Sbjct: 512 EVYKALGQLGFSSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRS--PC 569
Query: 347 QALILAPTRELAQ 385
L+++P L +
Sbjct: 570 LTLVISPLVSLME 582
>SB_54333| Best HMM Match : Glyco_hydro_39 (HMM E-Value=0)
Length = 1325
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 473 IRQLESGVHVVVGTPGRVYDMITRRALHA 559
+RQ+ + V TP VYDM TR+ HA
Sbjct: 1129 VRQVNTTAIPRVSTPRHVYDMQTRQLFHA 1157
>SB_15811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 436 AFSIQVITKSYHHLLNLLGQLSCGSQDQSLTFTNACID 323
A ++Q +TK+Y HL+N+ G +++ T C D
Sbjct: 201 AHALQTLTKAYRHLMNVTGN---RDKEEKANATEQCAD 235
>SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 38 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 169
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 71 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 111
>SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 38 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEE 169
+D N + D G+ D D GT+D D D V+ DD N +
Sbjct: 54 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDNFDND 94
>SB_26279| Best HMM Match : S-antigen (HMM E-Value=3)
Length = 613
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 554 EAHDELSYHIHDLECPPPHEHHSPVGEYLHGHWC 453
E H L++H H +CP E+H+ + + H C
Sbjct: 89 EYHAMLTFHTHFTQCPDFSEYHAMLPFHTHFTQC 122
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 190 GVYASQQFFFEVHVIEGFDNLIPVGVKC 107
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 551 LHANTIKLFVLDEADEML 604
L +IK+ VLDEADEML
Sbjct: 31 LDTRSIKMLVLDEADEML 48
>SB_4002| Best HMM Match : Galactosyl_T (HMM E-Value=3.1e-24)
Length = 683
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 532 IIYTTWSAHHHMNTTLQLANIFTD 461
II TW+ + H NTTL+ A F D
Sbjct: 110 IIRQTWTRNKHQNTTLEGAKHFYD 133
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,133,638
Number of Sequences: 59808
Number of extensions: 494861
Number of successful extensions: 2429
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 2189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2387
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -