Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0409
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   171   3e-45
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   2.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  171 bits (416), Expect = 3e-45
 Identities = 84/107 (78%), Positives = 94/107 (87%), Gaps = 1/107 (0%)
 Frame = -3

Query: 518 GYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHA 339
           GYMAAKKHLEINPD SI++ LRQKAEADKNDKAVKDLVILL+ETALLSSGFTLDEPQVHA
Sbjct: 615 GYMAAKKHLEINPDPSILKNLRQKAEADKNDKAVKDLVILLFETALLSSGFTLDEPQVHA 674

Query: 338 SRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLE-GDADDASRMEEVD 201
           SRIYRMIKLGLGIDE+E +  E+   GD P  +  +++DASRMEEVD
Sbjct: 675 SRIYRMIKLGLGIDEEEAMITEDAQGGDAPSADAAESEDASRMEEVD 721


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/48 (27%), Positives = 18/48 (37%)
 Frame = +3

Query: 6   VDPRAAGIRHEEREN*SRVXXXXXXILIIY*RDNGIFELNQSLAVHRC 149
           + P  + IRH E     RV      I   Y R+N    +N    +  C
Sbjct: 282 IQPTLSSIRHPESNPSERVMRELGRIFRAYCRENHASWVNHLSNIEDC 329


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 35   VPNSCSPGIH 6
            VP +C+PG+H
Sbjct: 1230 VPQNCAPGLH 1239


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 319 SNWVLVLMKMSRFRLKSLLLEMCRH 245
           SNW +    + R+  + L +++C H
Sbjct: 29  SNWAIYRPGIGRYAQEDLPVDLCTH 53


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 319 SNWVLVLMKMSRFRLKSLLLEMCRH 245
           +NW    +K+ +F  + ++ ++C H
Sbjct: 94  TNWSQYRVKIGKFTPEHIIPDLCTH 118


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 342 MDLGLIKREA 371
           +DLG+IKREA
Sbjct: 329 LDLGVIKREA 338



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/30 (23%), Positives = 14/30 (46%)
 Frame = +3

Query: 108 GIFELNQSLAVHRCTKTNHYDMVPTVKVEI 197
           G  E+N S  +  C K  H +    ++ ++
Sbjct: 231 GHIEVNHSAPITTCNKKQHLESPSALQAKV 260


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 429 ILVGFRFLP*CFHNRVIRIDFQML 500
           +L+  + +P CF  RVIR+  + L
Sbjct: 181 LLIFVQQIPFCFFVRVIRLKIEDL 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,729
Number of Sequences: 336
Number of extensions: 2014
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)