Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0409
(520 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 135 2e-32
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 133 9e-32
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 129 1e-30
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 129 1e-30
04_01_0042 + 473912-474058,474208-474349,474442-476264 125 2e-29
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 75 3e-14
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 65 4e-11
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 62 2e-10
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 57 7e-09
01_01_0645 + 4890647-4890682,4891684-4891929,4892021-4892317,489... 30 1.3
12_01_0179 - 1319291-1319332,1319884-1320579,1322759-1323207,132... 29 3.0
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141... 29 3.0
08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814... 28 3.9
06_01_0243 - 1837830-1837886,1837969-1838016,1838113-1838255,183... 27 6.8
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 27 6.8
08_02_0931 - 22708167-22709093 27 9.0
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 27 9.0
04_04_1075 + 30634141-30634320,30634917-30635014,30635113-306351... 27 9.0
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 135 bits (327), Expect = 2e-32
Identities = 66/106 (62%), Positives = 88/106 (83%)
Frame = -3
Query: 518 GYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHA 339
GYM++KK +EINP+++I+E LR++A+ADKNDK+VKDLV+LL+ETALL+SGF+LD+P
Sbjct: 599 GYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFG 658
Query: 338 SRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEEVD 201
SRI+RM+KLGL IDEDE + A D+PPLE DA + S+MEEVD
Sbjct: 659 SRIHRMLKLGLSIDEDETAE----ADTDMPPLEDDAGE-SKMEEVD 699
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 133 bits (321), Expect = 9e-32
Identities = 64/106 (60%), Positives = 88/106 (83%)
Frame = -3
Query: 518 GYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHA 339
GYM++KK +EINP++SI++ LR++A+ADKNDK+VKDLV+LL+ETALL+SGF+L++P
Sbjct: 599 GYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFG 658
Query: 338 SRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEEVD 201
+RI+RM+KLGL IDEDE + A D+PPLE DA + S+MEEVD
Sbjct: 659 TRIHRMLKLGLSIDEDESAE----ADADMPPLEDDAGE-SKMEEVD 699
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 129 bits (312), Expect = 1e-30
Identities = 62/105 (59%), Positives = 87/105 (82%)
Frame = -3
Query: 518 GYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHA 339
GYM++KK +EINP+++I++ LR++A+ADKNDK+VKDLV+LL+ETALL+SGF+L++P
Sbjct: 345 GYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFG 404
Query: 338 SRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEEV 204
+RI+RM+KLGL IDEDE + A D+PPLE DA + S+MEEV
Sbjct: 405 TRIHRMLKLGLSIDEDESAE----ADADMPPLEDDAGE-SKMEEV 444
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 129 bits (312), Expect = 1e-30
Identities = 62/105 (59%), Positives = 87/105 (82%)
Frame = -3
Query: 518 GYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHA 339
GYM++KK +EINP+++I++ LR++A+ADKNDK+VKDLV+LL+ETALL+SGF+L++P
Sbjct: 599 GYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFG 658
Query: 338 SRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEEV 204
+RI+RM+KLGL IDEDE + A D+PPLE DA + S+MEEV
Sbjct: 659 TRIHRMLKLGLSIDEDESAE----ADADMPPLEDDAGE-SKMEEV 698
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 125 bits (302), Expect = 2e-29
Identities = 58/105 (55%), Positives = 85/105 (80%)
Frame = -3
Query: 515 YMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHAS 336
YM++KK +EINP++ I+E LR++A+AD NDK+V+DLV+LL+ETALL+SGF+LD+P A+
Sbjct: 601 YMSSKKTMEINPENGIMEELRKRADADANDKSVRDLVLLLFETALLTSGFSLDDPNTFAA 660
Query: 335 RIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEEVD 201
RI+RM+KLGL ID+D+ ++ A D+P L+ A + S+MEEVD
Sbjct: 661 RIHRMLKLGLNIDDDDAAAADDDA--DMPALDDAAAEESKMEEVD 703
>06_03_1404 - 29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 74.9 bits (176), Expect = 3e-14
Identities = 38/103 (36%), Positives = 60/103 (58%)
Frame = -3
Query: 515 YMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHAS 336
YM K+ LEINP H I++ LR K D +++K L+Y+TAL+ SGF L +P+ AS
Sbjct: 728 YMRGKRVLEINPRHPIIKELRDKVAQDSESESLKQTAKLVYQTALMESGFNLPDPKDFAS 787
Query: 335 RIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEE 207
IYR ++ L + D ++ EE +V E + ++S ++E
Sbjct: 788 SIYRSVQKSLDLSPDAAVEEEE----EVEEAEVEEKESSNIKE 826
>09_04_0497 - 18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 64.9 bits (151), Expect = 4e-11
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = -3
Query: 515 YMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHAS 336
+M ++ EINPDH IV+ L + + K V LLYETAL+SSG+T D P
Sbjct: 685 FMRGRRIFEINPDHPIVKDLSAACKNEPESTEAKRAVELLYETALISSGYTPDSPAELGG 744
Query: 335 RIYRMIKLGLGIDEDEPIQVEEPASG---DVPPLEGDADDASRMEEV 204
+IY M+ + LG P + E S +V EG A + EV
Sbjct: 745 KIYEMMTIALGGRWGRPEESEAATSESNVEVESSEGSATEVVEPSEV 791
>08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = -3
Query: 515 YMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHAS 336
+M ++ EINPDH IV+ L + + K V LLYETAL+SSG+T D P
Sbjct: 934 FMRGRRIFEINPDHPIVKDLNAACKNEPESTEAKRAVELLYETALISSGYTPDSPAELGG 993
Query: 335 RIYRMIKLGLG 303
+IY M+ + LG
Sbjct: 994 KIYEMMTIALG 1004
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 57.2 bits (132), Expect = 7e-09
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = -3
Query: 515 YMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHAS 336
+M ++K EINP+H I++ L A+ +D V +L+ET+++SSGFT D P +
Sbjct: 945 FMRSRKVFEINPEHEIIKGLNAACRANPDDPEALKAVDILFETSMISSGFTPDNPAELSG 1004
Query: 335 RIYRMIKLGL 306
+IY M+ +
Sbjct: 1005 KIYEMMSTAM 1014
>01_01_0645 +
4890647-4890682,4891684-4891929,4892021-4892317,
4892407-4892574,4892674-4892841,4892924-4893004,
4893105-4893171,4893657-4893751,4894027-4894099,
4894177-4894247,4894325-4894374,4895263-4895375,
4895461-4895513
Length = 505
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 326 RMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDAS 219
R++ G+D DE + + EP D+P + G A S
Sbjct: 256 RIVLAATGVDHDELVSIAEPLLSDMPGVTGPAKPKS 291
>12_01_0179 -
1319291-1319332,1319884-1320579,1322759-1323207,
1323291-1324903,1324991-1325077,1326983-1327251
Length = 1051
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = -3
Query: 428 DKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVP 249
D ++ D++ +L E L +D H S + R L D+DE EE AS D
Sbjct: 344 DASMTDIIPMLEELHPL-----IDLQTGHPSLVSRD-NLNTSSDDDEDDLEEEDASTDEN 397
Query: 248 PLEGDADDASRMEEV 204
LEG DD + ++V
Sbjct: 398 QLEGKIDDFANWKDV 412
>11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,
1414639-1414725,1416244-1416411,1416785-1416958,
1417662-1417720,1418132-1420154,1420549-1420647,
1420998-1421796,1422101-1422120,1422446-1422513
Length = 1827
Score = 28.7 bits (61), Expect = 3.0
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = -3
Query: 428 DKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPASGDVP 249
D ++ D++ +L E L +D H S + R L D+DE EE AS D
Sbjct: 1391 DASMTDIIPMLEELHPL-----IDLQTGHPSLVSRD-NLNTSSDDDEDDLEEEDASTDEN 1444
Query: 248 PLEGDADDASRMEEV 204
LEG DD + ++V
Sbjct: 1445 QLEGKIDDFANWKDV 1459
>08_01_0835 +
8147177-8147359,8147871-8147968,8148045-8148102,
8148192-8148271,8148770-8148872,8148966-8149181
Length = 245
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 285 RLIFINTKTQFDHSIDTGSMDLGLIKREARRQQGSFIQ*DNKILNSFVILV 437
+LIF K Q+ D +L +KREAR + G ++ + K+L FV+ +
Sbjct: 45 KLIFARAK-QYAQEYDAQEKELVQLKREARMKGGFYVSPEAKLL--FVVRI 92
>06_01_0243 -
1837830-1837886,1837969-1838016,1838113-1838255,
1838784-1838982,1839085-1839265,1839857-1840228,
1841453-1841658
Length = 401
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -3
Query: 359 DEPQVHASRIYRMIKLGLGIDEDEPIQVEEP 267
+E +V ASRI RMI+ GL D DEP + +P
Sbjct: 369 EEEEVKASRIRRMIE-GLD-DSDEPEDIFDP 397
>05_06_0132 +
25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 326 RMIKLGLGIDEDEPIQVEEPASGDVPPLE 240
RM+ GI+ DE + V EP D+P ++
Sbjct: 301 RMVLAASGIEHDELVSVAEPLLSDLPSVK 329
>08_02_0931 - 22708167-22709093
Length = 308
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 347 VHASRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEEV 204
V A Y +++G G E Q++ P+ GDV L GD D + V
Sbjct: 255 VWAVTAYLCLRVG-GSRSMEYRQIQAPSGGDVGALAGDGDATQSQKRV 301
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 284 IQVEEPASGDVPPLEGDADDASRMEEVD 201
++ EPA+ P EG+ + ++EEVD
Sbjct: 30 LEEAEPAAAAAPAAEGEGEHKRKLEEVD 57
>04_04_1075 +
30634141-30634320,30634917-30635014,30635113-30635170,
30635259-30635338,30635686-30635788,30635847-30636080
Length = 250
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 285 RLIFINTKTQFDHSIDTGSMDLGLIKREARRQQGSFIQ*DNKILNSFVILV 437
+LIF K Q+ + +L +KREAR + G ++ + K+L FV+ +
Sbjct: 44 KLIFSRAK-QYAEEYEAQEKELVQLKREARMKGGFYVSPEEKLL--FVVRI 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,160,185
Number of Sequences: 37544
Number of extensions: 240830
Number of successful extensions: 623
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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