Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0409
         (520 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...   148   3e-36
Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...    60   9e-10
Z68108-2|CAA92135.1|  406|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AC024775-2|AAK68456.1|  452|Caenorhabditis elegans Hypothetical ...    29   1.5  
U55857-5|AAA98031.1|  602|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z47356-5|CAA87418.1|  173|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score =  148 bits (358), Expect = 3e-36
 Identities = 73/107 (68%), Positives = 86/107 (80%), Gaps = 1/107 (0%)
 Frame = -3

Query: 518 GYMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHA 339
           GYMAAKKHLEINPDH+I++TLR + E DKNDK VKDLV+LL+ETALL+SGF+L+EPQ HA
Sbjct: 596 GYMAAKKHLEINPDHAIMKTLRDRVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQSHA 655

Query: 338 SRIYRMIKLGLGIDEDEPIQVEEPASGDV-PPLEGDADDASRMEEVD 201
           SRIYRMIKLGL I +DE      P+S      +EG  +DASRMEEVD
Sbjct: 656 SRIYRMIKLGLDIGDDEIEDSAVPSSCTAEAKIEGAEEDASRMEEVD 702


>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score = 60.1 bits (139), Expect = 9e-10
 Identities = 32/103 (31%), Positives = 53/103 (51%)
 Frame = -3

Query: 515 YMAAKKHLEINPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHAS 336
           Y   KK  EINP H +++ L ++  A + D        LL+ETA L SGF+L +    A 
Sbjct: 655 YATQKKTFEINPRHPVIKELLKRVTASEEDTTAASTAKLLFETATLRSGFSLQDQVGFAD 714

Query: 335 RIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEGDADDASRMEE 207
           RI  +++  L + +D  ++ E+      P  E +A + + +EE
Sbjct: 715 RIEAVLRQSLDVSQDAQVETEQHIEEAEP--EPEAAEETTIEE 755


>Z68108-2|CAA92135.1|  406|Caenorhabditis elegans Hypothetical
           protein T05A10.3 protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -3

Query: 296 EDEPIQVEEPASGDVPPLEGDADDASRMEEVD*D 195
           ++EP++VEEP    V P EGD   AS  E +  D
Sbjct: 182 DEEPVEVEEPV---VEPTEGDEQMASSSEHITKD 212


>AC024775-2|AAK68456.1|  452|Caenorhabditis elegans Hypothetical
           protein Y41D4A.6 protein.
          Length = 452

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -3

Query: 365 TLDEPQVHAS---RIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEG 237
           +LD P + A    + + +++L  GID+++   VE P    +  LEG
Sbjct: 184 SLDAPSIFAKTAQKCWELLELSKGIDKNDSTSVELPEKAGISSLEG 229


>U55857-5|AAA98031.1|  602|Caenorhabditis elegans Hypothetical
           protein K08D10.5 protein.
          Length = 602

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 496 IWKSILITRLWKH*GRKRKPTRMTKLLRILLSYCMKLP 383
           +WK+ LI+R+ +H  R  +P     +   LL   +KLP
Sbjct: 232 LWKNYLISRIREHNTRDAEPNEWIVMAARLLKAAVKLP 269


>Z47356-5|CAA87418.1|  173|Caenorhabditis elegans Hypothetical
           protein T15H9.5 protein.
          Length = 173

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -3

Query: 503 KKHLEINPDHSIVETLRQKAEADKNDKAVKDLVI 402
           KK  +  PD  + + ++++ +AD N+  VK+L I
Sbjct: 86  KKEEDKEPDEKVEKDVKKEVKADNNEPLVKNLKI 119


>Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical
           protein ZK970.5 protein.
          Length = 1143

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
 Frame = +3

Query: 153 KTNHYDMV------PTVKVEILINLLHARCIIGITLQWRHISRSRLFNLNRLIFI 299
           KTN+YD++      P +K+   ++ ++ + ++G    W  +S S + ++NR  F+
Sbjct: 103 KTNNYDVIIGPPCAPALKMMGTLSTIYKKPVLG----WGFVSESEISDMNRFPFV 153


>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
           protein F54D11.2 protein.
          Length = 1145

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 302 IDEDEPIQVEEPASGDVPPLEGDADDASRMEE 207
           +++DEP    E  S DVP     +D+AS ++E
Sbjct: 115 MNKDEPSTSTEAPSADVPGTSEASDEASEIQE 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,959,410
Number of Sequences: 27780
Number of extensions: 201462
Number of successful extensions: 488
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)