Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0407
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   1.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.0  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.9  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 522 NRIKRFLR*NYMLKLMPPK 578
           +RIKRFLR  Y +K   PK
Sbjct: 115 HRIKRFLRGVYRIKPSKPK 133


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = +1

Query: 103 KKCLDIYEEAKERTD---HMIEQKRKKLK 180
           KKCL+++EE  E  D      EQ  K +K
Sbjct: 407 KKCLELFEELAEDKDGYKKFYEQFSKNIK 435


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 400 ISTESRRELEDLPVHE*R*KEKENTIVQ 483
           I+ ++RRE E+   H+ + +EK+  I Q
Sbjct: 71  INEQARREREEQERHKQQQQEKQQKIEQ 98


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 362 VSLEKEWAKNFEESRQSRVE 421
           + LE+E+A N   SR  R+E
Sbjct: 130 LELEREFASNMYLSRLRRIE 149


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -3

Query: 186 FLFQLFPFLFYHMIC 142
           F + + P LF+ ++C
Sbjct: 947 FYYNIIPILFFMLVC 961


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -3

Query: 186 FLFQLFPFLFYHMIC 142
           F + + P LF+ ++C
Sbjct: 947 FYYNIIPILFFMLVC 961


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -3

Query: 186 FLFQLFPFLFYHMIC 142
           F + + P LF+ ++C
Sbjct: 947 FYYNIIPILFFMLVC 961


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -3

Query: 186 FLFQLFPFLFYHMIC 142
           F + + P LF+ ++C
Sbjct: 947 FYYNIIPILFFMLVC 961


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 400 ISTESRRELEDLPVHE*R*KEKENTIVQ 483
           I+ ++RRE E+   H+ + +EK+  I Q
Sbjct: 222 INEQARREREEQERHKQQQQEKQQKIEQ 249


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 400 ISTESRRELEDLPVHE*R*KEKENTIVQ 483
           I+ ++RRE E+   H+ + +EK+  I Q
Sbjct: 281 INEQARREREEQERHKQQQQEKQQKIEQ 308


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,667
Number of Sequences: 336
Number of extensions: 2679
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)